RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 KPNA6O60684 536 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 STK10O94804 968 aaKnown RBP8.15□□□□□ -1.1
TCF4-216ENST00000562680 GRB10Q13322 594 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 PPP1R7Q15435 360 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 CATSPERGQ6ZRH7 1159 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 RIOX2Q8IUF8 465 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 PARP2Q9UGN5 583 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 MKRN1Q9UHC7 482 aaKnown RBP8.15□□□□□ -1.1
TCF4-216ENST00000562680 IKBKGQ9Y6K9 419 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 ADAMTS7Q9UKP4 1686 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 A0A1B0GTH6 734 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 CEP104O60308 925 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 GAS8O95995 478 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 OATP04181 439 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 MAPTP10636 758 aaKnown RBP8.15□□□□□ -1.1
TCF4-216ENST00000562680 PPFIA1Q13136 1202 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 EMC2Q15006 297 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 ZNF484Q5JVG2 852 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 CFAP58Q5T655 872 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 ZNF365Q70YC5 407 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 CATSPER3Q86XQ3 398 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 IFT20Q8IY31 132 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 CHCHD3Q9NX63 227 aaKnown RBP8.15□□□□□ -1.1
TCF4-216ENST00000562680 SH3BP1Q9Y3L3 701 aa8.15□□□□□ -1.1
TCF4-216ENST00000562680 SFI1A8K8P3 1242 aa8.15□□□□□ -1.11
TCF4-216ENST00000562680 FOXN1O15353 648 aa8.15□□□□□ -1.11
TCF4-216ENST00000562680 THAP12O43422 761 aa8.15□□□□□ -1.11
TCF4-216ENST00000562680 NDUFA10O95299 355 aa8.15□□□□□ -1.11
TCF4-216ENST00000562680 CASP1P29466 404 aa8.15□□□□□ -1.11
TCF4-216ENST00000562680 GBP1P32455 592 aa8.15□□□□□ -1.11
TCF4-216ENST00000562680 GPR161Q8N6U8 529 aaKnown RBP8.15□□□□□ -1.11
TCF4-216ENST00000562680 RNF217Q8TC41 542 aa8.15□□□□□ -1.11
TCF4-216ENST00000562680 UPF1Q92900 1129 aaKnown RBP eCLIP8.15□□□□□ -1.11
TCF4-216ENST00000562680 IQCGQ9H095 443 aaKnown RBP8.15□□□□□ -1.11
TCF4-216ENST00000562680 FAM49AQ9H0Q0 323 aaPredicted RBP8.15□□□□□ -1.11
TCF4-216ENST00000562680 VTA1Q9NP79 307 aa8.15□□□□□ -1.11
TCF4-216ENST00000562680 MED4Q9NPJ6 270 aa8.15□□□□□ -1.11
TCF4-216ENST00000562680 PRMT7Q9NVM4 692 aaPredicted RBP8.15□□□□□ -1.11
TCF4-216ENST00000562680 CYP3A7-CYP3A51PA0A087WV96 503 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 TRIM49BA6NDI0 452 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 SUPT20HL2P0C7V6 817 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 CYP3A7P24462 503 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 CPT1AP50416 773 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 ACTR2P61160 394 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 EP400NLQ6ZTU2 488 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 RHOT2Q8IXI1 618 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 SHCBP1Q8NEM2 672 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 SLC5A5Q92911 643 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 SNX25Q9H3E2 840 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 STIM2Q9P246 746 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 A0A087WWV3 80 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 RNF8O76064 485 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 MAN1A1P33908 653 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 FUT2Q10981 343 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 DGKDQ16760 1214 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 TRIM72Q6ZMU5 477 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 ARFGAP2Q8N6H7 521 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 BEST2Q8NFU1 509 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 KLRG1Q96E93 195 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 UBE2TQ9NPD8 197 aaPredicted RBP8.14□□□□□ -1.11
TCF4-216ENST00000562680 AGO2Q9UKV8 859 aaKnown RBP8.14□□□□□ -1.11
TCF4-216ENST00000562680 C10orf71Q711Q0 1435 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 IGKV6D-41A0A0C4DH26 115 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 ADM5C9JUS6 153 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 FZD9O00144 591 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 MYO1FO00160 1098 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 PPP2R5CQ13362 524 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 VGLL4Q14135 290 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 METTL7BQ6UX53 244 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 PDZD4Q76G19 769 aaPredicted RBP8.14□□□□□ -1.11
TCF4-216ENST00000562680 ARMCX2Q7L311 632 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 RNF169Q8NCN4 708 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 RAET1EQ8TD07 263 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 GLIS2Q9BZE0 524 aaPredicted RBP8.14□□□□□ -1.11
TCF4-216ENST00000562680 RAB17Q9H0T7 212 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 LRFN2Q9ULH4 789 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 NFIBO00712 420 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 PRKCBP05771 671 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 CCDC14Q49A88 953 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 DAAM2Q86T65 1068 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 SOCS4Q8WXH5 440 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 UNC45AQ9H3U1 944 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 AGO4Q9HCK5 861 aaKnown RBP8.14□□□□□ -1.11
TCF4-216ENST00000562680 SUCLA2Q9P2R7 463 aaPredicted RBP8.14□□□□□ -1.11
TCF4-216ENST00000562680 NUP98P52948 1817 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 VIRMAQ69YN4 1812 aaKnown RBP8.14□□□□□ -1.11
TCF4-216ENST00000562680 FOXP2O15409 715 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 PAK2Q13177 524 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 ANKRD40Q6AI12 368 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 EEF2KMTQ96G04 330 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 DESI2Q9BSY9 194 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 ASCC2Q9H1I8 757 aaPredicted RBP8.14□□□□□ -1.11
TCF4-216ENST00000562680 SCINQ9Y6U3 715 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 NHSQ6T4R5 1651 aa8.14□□□□□ -1.11
TCF4-216ENST00000562680 GLI3P10071 1580 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 NFKBIEO00221 500 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 CA8P35219 290 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 EIF4A3P38919 411 aaKnown RBP8.13□□□□□ -1.11
TCF4-216ENST00000562680 KIF11P52732 1056 aa8.13□□□□□ -1.11
TCF4-216ENST00000562680 STK4Q13043 487 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms