RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 NLRP5P59047 1200 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 NKX3-2P78367 333 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 PURAQ00577 322 aaKnown RBP6.61□□□□□ -1.35
CDH13-206ENST00000562601 FAAP100Q0VG06 881 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 ITGA7Q13683 1181 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 SNX17Q15036 470 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 BRDTQ58F21 947 aaPredicted RBP6.61□□□□□ -1.35
CDH13-206ENST00000562601 FAM47CQ5HY64 1035 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 CELF3Q5SZQ8 465 aaKnown RBP6.61□□□□□ -1.35
CDH13-206ENST00000562601 CPLX2Q6PUV4 134 aaKnown RBP6.61□□□□□ -1.35
CDH13-206ENST00000562601 NLRX1Q86UT6 975 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 ALYREFQ86V81 257 aaKnown RBP6.61□□□□□ -1.35
CDH13-206ENST00000562601 ZNF713Q8N859 430 aaPredicted RBP6.61□□□□□ -1.35
CDH13-206ENST00000562601 GPR152Q8TDT2 470 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 BADQ92934 168 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 SPATA33Q96N06 139 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 INPP4AQ96PE3 977 aaPredicted RBP6.61□□□□□ -1.35
CDH13-206ENST00000562601 MTG1Q9BT17 334 aaPredicted RBP6.61□□□□□ -1.35
CDH13-206ENST00000562601 ALG1Q9BT22 464 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 ZMYND12Q9H0C1 365 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 IGFLR1Q9H665 355 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 MLXIPQ9HAP2 919 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 PDLIM7Q9NR12 457 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 TMEM39AQ9NV64 488 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 NOP53Q9NZM5 478 aaKnown RBP6.61□□□□□ -1.35
CDH13-206ENST00000562601 PRKAG2Q9UGJ0 569 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 USP20Q9Y2K6 914 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 KCNMB2Q9Y691 235 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 LTBP2Q14767 1821 aa6.61□□□□□ -1.35
CDH13-206ENST00000562601 SCN10AQ9Y5Y9 1956 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 DCDC2CA8MYV0 355 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 FIBPO43427 364 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 CABYRO75952 493 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 CDKL5O76039 1030 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 FOSP01100 380 aaPredicted RBP6.6□□□□□ -1.35
CDH13-206ENST00000562601 PSAPP07602 524 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 FDPSP14324 419 aaKnown RBP6.6□□□□□ -1.35
CDH13-206ENST00000562601 NPR3P17342 541 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 MPSTP25325 297 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 TARSP26639 723 aaKnown RBP6.6□□□□□ -1.35
CDH13-206ENST00000562601 IRS1P35568 1242 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 SCNN1AP37088 669 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 RBM25P49756 843 aaKnown RBP6.6□□□□□ -1.35
CDH13-206ENST00000562601 ST3GAL1Q11201 340 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 MTMR1Q13613 665 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 DGKDQ16760 1214 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 HSDL1Q3SXM5 330 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 GNPTABQ3T906 1256 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 FAM26DQ5JW98 314 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 UTP14CQ5TAP6 766 aaKnown RBP6.6□□□□□ -1.35
CDH13-206ENST00000562601 KCNV1Q6PIU1 500 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 ANKRD33Q7Z3H0 272 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 CCDC83Q8IWF9 413 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 REXO1Q8N1G1 1221 aaKnown RBP6.6□□□□□ -1.35
CDH13-206ENST00000562601 SLC43A3Q8NBI5 491 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 NSUN7Q8NE18 718 aaKnown RBP6.6□□□□□ -1.35
CDH13-206ENST00000562601 PPTC7Q8NI37 304 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 CCDC12Q8WUD4 166 aaPredicted RBP6.6□□□□□ -1.35
CDH13-206ENST00000562601 KAT2BQ92831 832 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 GTF3C6Q969F1 213 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 MXRA8Q9BRK3 442 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 EHMT1Q9H9B1 1298 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 JADE2Q9NQC1 790 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 TRMT13Q9NUP7 481 aaKnown RBP6.6□□□□□ -1.35
CDH13-206ENST00000562601 DNAJB12Q9NXW2 375 aaKnown RBP6.6□□□□□ -1.35
CDH13-206ENST00000562601 ORC3Q9UBD5 711 aaPredicted RBP6.6□□□□□ -1.35
CDH13-206ENST00000562601 SLC6A14Q9UN76 642 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 UBIAD1Q9Y5Z9 338 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 KAT6AQ92794 2004 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 TRIOBPQ9H2D6 2365 aa6.6□□□□□ -1.35
CDH13-206ENST00000562601 LAMA2P24043 3122 aaKnown RBP6.6□□□□□ -1.35
CDH13-206ENST00000562601 SCN5AQ14524 2016 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 UMODL1Q5DID0 1318 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 ESYT2A0FGR8 921 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 FAM86B1E9PN63 330 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 DDX39AO00148 427 aaKnown RBP6.59□□□□□ -1.35
CDH13-206ENST00000562601 NOP56O00567 594 aaKnown RBP6.59□□□□□ -1.35
CDH13-206ENST00000562601 ZBTB39O15060 712 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 TLR3O15455 904 aaKnown RBP6.59□□□□□ -1.35
CDH13-206ENST00000562601 B4GALT4O60513 344 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 STAM2O75886 525 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 BRD1O95696 1058 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 CD4P01730 458 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 FAM86B2P0C5J1 330 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 TGFB3P10600 412 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 CYP2C9P11712 490 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 KCNA2P16389 499 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 MZF1P28698 734 aaPredicted RBP6.59□□□□□ -1.35
CDH13-206ENST00000562601 GNA11P29992 359 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 ICAM3P32942 547 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 CYP2C18P33260 490 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 SOX18P35713 384 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 SREBF1P36956 1147 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 EIF1AXP47813 144 aaKnown RBP6.59□□□□□ -1.35
CDH13-206ENST00000562601 NRLP54845 237 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 SNRPNP63162 240 aaKnown RBP6.59□□□□□ -1.35
CDH13-206ENST00000562601 GPLD1P80108 840 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 ARHGAP4P98171 946 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 ZNF200P98182 395 aaPredicted RBP6.59□□□□□ -1.35
CDH13-206ENST00000562601 PLAURQ03405 335 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms