RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 VWCEQ96DN2 955 aa18.12■□□□□ 0.49
USB1-206ENST00000562534 PPP1R16BQ96T49 567 aa18.12■□□□□ 0.49
USB1-206ENST00000562534 NFKBIZQ9BYH8 718 aa18.12■□□□□ 0.49
USB1-206ENST00000562534 IFIH1Q9BYX4 1025 aaKnown RBP18.12■□□□□ 0.49
USB1-206ENST00000562534 MTIF3Q9H2K0 278 aaKnown RBP18.12■□□□□ 0.49
USB1-206ENST00000562534 MAGEF1Q9HAY2 307 aa18.12■□□□□ 0.49
USB1-206ENST00000562534 IFT122Q9HBG6 1241 aa18.12■□□□□ 0.49
USB1-206ENST00000562534 GPRC5CQ9NQ84 441 aa18.12■□□□□ 0.49
USB1-206ENST00000562534 ODF2LQ9ULJ1 636 aa18.12■□□□□ 0.49
USB1-206ENST00000562534 PADI3Q9ULW8 664 aa18.12■□□□□ 0.49
USB1-206ENST00000562534 HPSEQ9Y251 543 aa18.12■□□□□ 0.49
USB1-206ENST00000562534 PDE4DIPQ5VU43 2346 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 ABHD14A-ACY1A0A1B0GW23 586 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 HIP1RO75146 1068 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 PFKFB1P16118 471 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 SYKP43405 635 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 PHKA2P46019 1235 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 PTENP60484 403 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 PAK2Q13177 524 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 PCBP1Q15365 356 aaKnown RBP eCLIP18.11■□□□□ 0.49
USB1-206ENST00000562534 IFNLR1Q8IU57 520 aaPredicted RBP18.11■□□□□ 0.49
USB1-206ENST00000562534 CEP57L1Q8IYX8 460 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 FSIP1Q8NA03 581 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 ASAP3Q8TDY4 903 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 HERVK_113Q902F9 699 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 ZNF668Q96K58 619 aaPredicted RBP18.11■□□□□ 0.49
USB1-206ENST00000562534 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.11■□□□□ 0.49
USB1-206ENST00000562534 NTPCRQ9BSD7 190 aaKnown RBP18.11■□□□□ 0.49
USB1-206ENST00000562534 FTHL17Q9BXU8 183 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 TNMDQ9H2S6 317 aa18.11■□□□□ 0.49
USB1-206ENST00000562534 AGO3Q9H9G7 860 aaKnown RBP18.11■□□□□ 0.49
USB1-206ENST00000562534 NOC2LQ9Y3T9 749 aaKnown RBP18.11■□□□□ 0.49
USB1-206ENST00000562534 LOXHD1Q8IVV2 1947 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 BAIAP3O94812 1187 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 SLFN14P0C7P3 912 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 CD52P31358 61 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 NAMPTP43490 491 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 SMTNP53814 917 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 NCBP1Q09161 790 aaKnown RBP18.1■□□□□ 0.49
USB1-206ENST00000562534 NFX1Q12986 1120 aaKnown RBP18.1■□□□□ 0.49
USB1-206ENST00000562534 GIT2Q14161 759 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 CHRDL2Q6WN34 429 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 TMEM87AQ8NBN3 555 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 TMEM40Q8WWA1 233 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 OSBPL7Q9BZF2 842 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 POLD4Q9HCU8 107 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 KBTBD4Q9NVX7 518 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 PCDH10Q9P2E7 1040 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 LARSQ9P2J5 1176 aaKnown RBP18.1■□□□□ 0.49
USB1-206ENST00000562534 ST3GAL5Q9UNP4 418 aa18.1■□□□□ 0.49
USB1-206ENST00000562534 LRRIQ4A6NIV6 560 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 SFI1A8K8P3 1242 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 TNRC18O15417 2968 aaPredicted RBP18.09■□□□□ 0.49
USB1-206ENST00000562534 PLS3P13797 630 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 SFPQP23246 707 aaKnown RBP eCLIP18.09■□□□□ 0.49
USB1-206ENST00000562534 NDUFA8P51970 172 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 RAD51AP2Q09MP3 1159 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 CAPSQ13938 189 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 SHHQ15465 462 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 TPRNQ4KMQ1 711 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 OTOP2Q7RTS6 562 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 ZBTB8OSQ8IWT0 167 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 DAW1Q8N136 415 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 DEPTORQ8TB45 409 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 DDX12PQ92771 950 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 CCDC34Q96HJ3 373 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 GBP4Q96PP9 640 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 C2orf40Q9H1Z8 148 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 PRO3102Q9H379 93 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 ERVK-5Q9HDB9 667 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 CHST12Q9NRB3 414 aa18.09■□□□□ 0.49
USB1-206ENST00000562534 LTBP2Q14767 1821 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 ARID2Q68CP9 1835 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 NPHP3-ACAD11A0A0J9YXS1 232 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 A0A1W2PPC1 479 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 MYMKA6NI61 221 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 CCDC169A6NNP5 214 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 FAM13AO94988 1023 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 ZNF202O95125 648 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 ZSCAN20P17040 1043 aaPredicted RBP18.08■□□□□ 0.48
USB1-206ENST00000562534 SCP2P22307 547 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 EFNA5P52803 228 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 PEX3P56589 373 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 MAPK7Q13164 816 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 DMP1Q13316 513 aaPredicted RBP18.08■□□□□ 0.48
USB1-206ENST00000562534 LONRF3Q496Y0 759 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 DYMQ7RTS9 669 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 FAM228AQ86W67 206 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 TDHQ8IZJ6 230 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 SPIRE2Q8WWL2 714 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 REEP2Q9BRK0 252 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 SERTAD1Q9UHV2 236 aa18.08■□□□□ 0.48
USB1-206ENST00000562534 PHLPP2Q6ZVD8 1323 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 H0YCG3 227 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 INO80B-WBP1J3KQ70 363 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 ENPP3O14638 875 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 TBCAO75347 108 aaKnown RBP18.07■□□□□ 0.48
USB1-206ENST00000562534 CSDE1O75534 798 aaKnown RBP18.07■□□□□ 0.48
USB1-206ENST00000562534 NPTX2P47972 431 aa18.07■□□□□ 0.48
USB1-206ENST00000562534 ZNF131P52739 623 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms