RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 CCDC146Q8IYE0 955 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 DCAF4Q8WV16 495 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 DIO2Q92813 273 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 ZNF333Q96JL9 665 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 ISCA1Q9BUE6 129 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 GPR27Q9NS67 375 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 YBX2Q9Y2T7 364 aaKnown RBP7.01□□□□□ -1.29
UBR1-203ENST00000562173 CUL9Q8IWT3 2517 aa7.01□□□□□ -1.29
UBR1-203ENST00000562173 IRS4O14654 1257 aaPredicted RBP7□□□□□ -1.29
UBR1-203ENST00000562173 MYO1BO43795 1136 aa7□□□□□ -1.29
UBR1-203ENST00000562173 NPHS1O60500 1241 aa7□□□□□ -1.29
UBR1-203ENST00000562173 FAM153BP0C7A2 387 aa7□□□□□ -1.29
UBR1-203ENST00000562173 PNLIPP16233 465 aa7□□□□□ -1.29
UBR1-203ENST00000562173 ARL4AP40617 200 aa7□□□□□ -1.29
UBR1-203ENST00000562173 ERVFC1P60507 584 aa7□□□□□ -1.29
UBR1-203ENST00000562173 SF3B3Q15393 1217 aaKnown RBP7□□□□□ -1.29
UBR1-203ENST00000562173 TIGD5Q53EQ6 642 aa7□□□□□ -1.29
UBR1-203ENST00000562173 Q8N1Y9 231 aa7□□□□□ -1.29
UBR1-203ENST00000562173 FAM43AQ8N2R8 423 aa7□□□□□ -1.29
UBR1-203ENST00000562173 LILRB2Q8N423 598 aa7□□□□□ -1.29
UBR1-203ENST00000562173 FAM168AQ92567 244 aa7□□□□□ -1.29
UBR1-203ENST00000562173 ZBED3Q96IU2 234 aaPredicted RBP7□□□□□ -1.29
UBR1-203ENST00000562173 RNF32Q9H0A6 362 aa7□□□□□ -1.29
UBR1-203ENST00000562173 PRO3102Q9H379 93 aa7□□□□□ -1.29
UBR1-203ENST00000562173 PDLIM7Q9NR12 457 aa7□□□□□ -1.29
UBR1-203ENST00000562173 TMEM260Q9NX78 707 aa7□□□□□ -1.29
UBR1-203ENST00000562173 IMPACTQ9P2X3 320 aa7□□□□□ -1.29
UBR1-203ENST00000562173 TSPYL4Q9UJ04 414 aa7□□□□□ -1.29
UBR1-203ENST00000562173 MRPS23Q9Y3D9 190 aaKnown RBP7□□□□□ -1.29
UBR1-203ENST00000562173 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
UBR1-203ENST00000562173 NAT1P18440 290 aa6.99□□□□□ -1.29
UBR1-203ENST00000562173 RPS12P25398 132 aaKnown RBP6.99□□□□□ -1.29
UBR1-203ENST00000562173 ERVFRD-1P60508 538 aa6.99□□□□□ -1.29
UBR1-203ENST00000562173 RPS8P62241 208 aaKnown RBP6.99□□□□□ -1.29
UBR1-203ENST00000562173 SF1Q15637 639 aaKnown RBP6.99□□□□□ -1.29
UBR1-203ENST00000562173 PKN2Q16513 984 aaKnown RBP6.99□□□□□ -1.29
UBR1-203ENST00000562173 PRSS53Q2L4Q9 553 aa6.99□□□□□ -1.29
UBR1-203ENST00000562173 YOD1Q5VVQ6 348 aaPredicted RBP6.99□□□□□ -1.29
UBR1-203ENST00000562173 NUP43Q8NFH3 380 aa6.99□□□□□ -1.29
UBR1-203ENST00000562173 BRI3BPQ8WY22 251 aa6.99□□□□□ -1.29
UBR1-203ENST00000562173 KISS1RQ969F8 398 aaPredicted RBP6.99□□□□□ -1.29
UBR1-203ENST00000562173 GCC1Q96CN9 775 aa6.99□□□□□ -1.29
UBR1-203ENST00000562173 EXOC2Q96KP1 924 aa6.99□□□□□ -1.29
UBR1-203ENST00000562173 DHRS4Q9BTZ2 278 aa6.99□□□□□ -1.29
UBR1-203ENST00000562173 VPS33BQ9H267 617 aa6.99□□□□□ -1.29
UBR1-203ENST00000562173 TNFRSF12AQ9NP84 129 aa6.99□□□□□ -1.29
UBR1-203ENST00000562173 GPRC5CQ9NQ84 441 aa6.99□□□□□ -1.29
UBR1-203ENST00000562173 FAM53CQ9NYF3 392 aa6.99□□□□□ -1.29
UBR1-203ENST00000562173 TMA7Q9Y2S6 64 aaKnown RBP6.99□□□□□ -1.29
UBR1-203ENST00000562173 LAS1LQ9Y4W2 734 aaKnown RBP6.99□□□□□ -1.29
UBR1-203ENST00000562173 VCANP13611 3396 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 PTPRFP10586 1907 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 A0A1W2PQ27 194 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 A0A1W2PQ64 194 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 A0A1W2PQC6 194 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 A0A1W2PQD8 194 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 HRKO00198 91 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 ELL2O00472 640 aaPredicted RBP6.98□□□□□ -1.29
UBR1-203ENST00000562173 SRGAP3O43295 1099 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 PSPNO60542 156 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 RPL11P62913 178 aaKnown RBP6.98□□□□□ -1.29
UBR1-203ENST00000562173 GABREP78334 506 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 TMEM62Q0P6H9 643 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 FYB2Q5VWT5 728 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 DENND5AQ6IQ26 1287 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 CABP7Q86V35 215 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 CCDC103Q8IW40 242 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.98□□□□□ -1.29
UBR1-203ENST00000562173 INTS4Q96HW7 963 aaKnown RBP6.98□□□□□ -1.29
UBR1-203ENST00000562173 MYD88Q99836 296 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 PLCD4Q9BRC7 762 aa6.98□□□□□ -1.29
UBR1-203ENST00000562173 MRPL4Q9BYD3 311 aaKnown RBP6.98□□□□□ -1.29
UBR1-203ENST00000562173 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.98□□□□□ -1.29
UBR1-203ENST00000562173 ARID1BQ8NFD5 2236 aaPredicted RBP6.98□□□□□ -1.29
UBR1-203ENST00000562173 DDX60LQ5H9U9 1706 aaKnown RBP6.98□□□□□ -1.29
UBR1-203ENST00000562173 SPTBN5Q9NRC6 3674 aaKnown RBP6.97□□□□□ -1.29
UBR1-203ENST00000562173 PLXNB2O15031 1838 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 PHIPQ8WWQ0 1821 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 C7orf72A4D263 438 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 ENPP3O14638 875 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 PRKCAP17252 672 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 TRHRP34981 398 aaPredicted RBP6.97□□□□□ -1.29
UBR1-203ENST00000562173 CACNB3P54284 484 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 SLC4A8Q2Y0W8 1093 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 TRIM61Q5EBN2 209 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 MBLAC2Q68D91 279 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 USP53Q70EK8 1073 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 JAZF1Q86VZ6 243 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 HOMER1Q86YM7 354 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 POU5F2Q8N7G0 328 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 AGBL3Q8NEM8 1001 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 DIS3LQ8TF46 1054 aaKnown RBP6.97□□□□□ -1.29
UBR1-203ENST00000562173 PTPRN2Q92932 1015 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 PRMT6Q96LA8 375 aaPredicted RBP6.97□□□□□ -1.29
UBR1-203ENST00000562173 RNPC3Q96LT9 517 aaKnown RBP6.97□□□□□ -1.29
UBR1-203ENST00000562173 TMX4Q9H1E5 349 aaPredicted RBP6.97□□□□□ -1.29
UBR1-203ENST00000562173 GREM2Q9H772 168 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 STAP2Q9UGK3 403 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 IRS2Q9Y4H2 1338 aa6.97□□□□□ -1.29
UBR1-203ENST00000562173 PRUNE2Q8WUY3 3088 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms