RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 ZNFX1Q9P2E3 1918 aaKnown RBP7.22□□□□□ -1.25
CAPN3-210ENST00000561817 ZSWIM8A7E2V4 1837 aa7.22□□□□□ -1.25
CAPN3-210ENST00000561817 IGKV6D-21A0A0A0MT36 114 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 N4BP3O15049 544 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 EIF3DO15371 548 aaKnown RBP eCLIP7.21□□□□□ -1.26
CAPN3-210ENST00000561817 TGFB1I1O43294 461 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 OFD1O75665 1012 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 GYPCP04921 128 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 CETPP11597 493 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 SKILP12757 684 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 PSMC5P62195 406 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 ERVK-9P63128 1117 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 ERVK-24P63145 666 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 RBL2Q08999 1139 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 STXBP2Q15833 593 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 NFIL3Q16649 462 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 TPD52L1Q16890 204 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-210ENST00000561817 EDRF1Q3B7T1 1238 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 ANO5Q75V66 913 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 ANKRD23Q86SG2 305 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 NCAPG2Q86XI2 1143 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 SMAP1Q8IYB5 467 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-210ENST00000561817 ANKRD35Q8N283 1001 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 SPIRE2Q8WWL2 714 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 HPS1Q92902 700 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 CDHR1Q96JP9 859 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 CEP63Q96MT8 703 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 ERGIC2Q96RQ1 377 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 CEP89Q96ST8 783 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 PTPN18Q99952 460 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 TUBGCP2Q9BSJ2 902 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 PAGR1Q9BTK6 254 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 TTYH3Q9C0H2 523 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 PORCNQ9H237 461 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 ANKEF1Q9NU02 776 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 MORF4L1Q9UBU8 362 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 SEL1LQ9UBV2 794 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 ODF2LQ9ULJ1 636 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 PCDHA10Q9Y5I2 948 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 COL4A3BPQ9Y5P4 624 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 ARID2Q68CP9 1835 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 MGAMO43451 1857 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 SYNGAP1Q96PV0 1343 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 IGSF9BQ9UPX0 1349 aa7.21□□□□□ -1.26
CAPN3-210ENST00000561817 GSTTP1A0A1W2PQM5 241 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 ARHGEF35A5YM69 484 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 TMEM150BA6NC51 233 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 USP27XA6NNY8 438 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 SFI1A8K8P3 1242 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 PDHXO00330 501 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 PDXKO00764 312 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 BACH1O14867 736 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 HIP1RO75146 1068 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 PRPF6O94906 941 aaKnown RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 KRT18P05783 430 aaKnown RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 SUPT20HL2P0C7V6 817 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 ZBTB48P10074 688 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 CYP2C8P10632 490 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 MAPTP10636 758 aaKnown RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 ATP4AP20648 1035 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 UBA1P22314 1058 aaKnown RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 SFPQP23246 707 aaKnown RBP eCLIP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 NMT1P30419 496 aaKnown RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 YWHABP31946 246 aaKnown RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 FXR1P51114 621 aaKnown RBP eCLIP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 GTF2A2P52657 109 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 MCCD1P59942 119 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 ACTR2P61160 394 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 FKBP3Q00688 224 aaKnown RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 KNOP1Q1ED39 458 aaKnown RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 GNPTABQ3T906 1256 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 FILIP1LQ4L180 1135 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 E4F1Q66K89 784 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 PTCRAQ6ISU1 281 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 DPY19L2P1Q6NXN4 242 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 CCDC62Q6P9F0 684 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 ZNF720Q7Z2F6 126 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 CCDC60Q8IWA6 550 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 FAM114A1Q8IWE2 563 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 TRIM59Q8IWR1 403 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 NELFCDQ8IXH7 590 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 GTF3C2Q8WUA4 911 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 TMEM174Q8WUU8 243 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 EEF2KMTQ96G04 330 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 BORCS6Q96GS4 357 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 PANX2Q96RD6 677 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 PCYT2Q99447 389 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 IKZF4Q9H2S9 585 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 ST6GALNAC4Q9H4F1 302 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 MROH8Q9H579 483 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 PARVGQ9HBI0 331 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 JPH1Q9HDC5 661 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-210ENST00000561817 DMAC2Q9NW81 257 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 SLC9A2Q9UBY0 812 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 SIK3Q9Y2K2 1263 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 MYH11P35749 1972 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 CASP8AP2Q9UKL3 1982 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 UBE4BO95155 1302 aa7.2□□□□□ -1.26
CAPN3-210ENST00000561817 ADGRA2Q96PE1 1338 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms