RNA–Protein interactions for RNA: ENST00000561726.1

TNRC6A-208, Transcript of trinucleotide repeat containing 6A, human

TSL 4

Gene TNRC6A, Length 543 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNRC6A-208	ENST00000561726	NDUFAF2	Q8N183	169 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	PPM1K	Q8N3J5	372 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	NKAP	Q8N5F7	415 aa	Known RBP	4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	CNTD1	Q8N815	330 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	PARD3B	Q8TEW8	1205 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	KCTD13	Q8WZ19	329 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	GOLGA1	Q92805	767 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	TTC17	Q96AE7	1141 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	CLIP3	Q96DZ5	547 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	GPR20	Q99678	358 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	JAM3	Q9BX67	310 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	CDIP1	Q9H305	208 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	KLHL11	Q9NVR0	708 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	SMPD4	Q9NXE4	827 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	ACAD8	Q9UKU7	415 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	WASF3	Q9UPY6	502 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	LUC7L2	Q9Y383	392 aa	Known RBP	4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	NPFFR2	Q9Y5X5	522 aa		4.08	□□□□□ -1.76
TNRC6A-208	ENST00000561726	WASHC2A	Q641Q2	1341 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726		J3KRW8	73 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	AGRP	O00253	132 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	BRINP1	O60477	761 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	DLX3	O60479	287 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	MTA2	O94776	668 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	SETSIP	P0DME0	302 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	ZNF28	P17035	718 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	IL13	P35225	146 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	CLK1	P49759	484 aa	Known RBP	4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	MLLT6	P55198	1093 aa	Predicted RBP	4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	ADAM17	P78536	824 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	TMPRSS15	P98073	1019 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	MAP4K2	Q12851	820 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	SEPT2	Q15019	361 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	ARHGAP29	Q52LW3	1261 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	GPR158	Q5T848	1215 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	TMC5	Q6UXY8	1006 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	USP53	Q70EK8	1073 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	SRL	Q86TD4	932 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	HSCB	Q8IWL3	235 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	FAM186B	Q8IYM0	893 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	OR8H2	Q8N162	312 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	COG1	Q8WTW3	980 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	POF1B	Q8WVV4	589 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	RPGR	Q92834	1020 aa	Known RBP	4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	BORCS6	Q96GS4	357 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	PAWR	Q96IZ0	340 aa	Known RBP	4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	LOXL4	Q96JB6	756 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	TBATA	Q96M53	351 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	SEZ6L	Q9BYH1	1024 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	EPN3	Q9H201	632 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	EPB41L1	Q9H4G0	881 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	KMT5A	Q9NQR1	393 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	SH3GLB2	Q9NR46	395 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	INTS7	Q9NVH2	962 aa	Known RBP	4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	MYOT	Q9UBF9	498 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	RBPJL	Q9UBG7	517 aa		4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.07	□□□□□ -1.76
TNRC6A-208	ENST00000561726	ZNF536	O15090	1300 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	FAM170A	A1A519	330 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	ERC2	O15083	957 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	B4GALT3	O60512	393 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	CYP1A1	P04798	512 aa	Predicted RBP	4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	PF4V1	P10720	104 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	SDS	P20132	328 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	RXRG	P48443	463 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	ADCY1	Q08828	1119 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	NEXN	Q0ZGT2	675 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	WASHC5	Q12768	1159 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	GALE	Q14376	348 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	DHCR24	Q15392	516 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	PTPN21	Q16825	1174 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	ABCB5	Q2M3G0	1257 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	GLIPR1L2	Q4G1C9	344 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	PKN3	Q6P5Z2	889 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	BORA	Q6PGQ7	559 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	LIMS2	Q7Z4I7	341 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	FAM124A	Q86V42	546 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	RBM12B	Q8IXT5	1001 aa	Known RBP	4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	AHI1	Q8N157	1196 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	LRRC47	Q8N1G4	583 aa	Known RBP	4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	PIP4K2C	Q8TBX8	421 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	LCOR	Q96JN0	433 aa	Predicted RBP	4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	C8orf49	Q96NF6	230 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	CLUHP3	Q96NS8	147 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	CLIC6	Q96NY7	704 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	MYD88	Q99836	296 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	KRTAP3-1	Q9BYR8	98 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	SMOC1	Q9H4F8	434 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	L2HGDH	Q9H9P8	463 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	MAN1C1	Q9NR34	630 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	GPR27	Q9NS67	375 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	ASH2L	Q9UBL3	628 aa		4.06	□□□□□ -1.76
TNRC6A-208	ENST00000561726	DDX20	Q9UHI6	824 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms