RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 POLR3CQ9BUI4 534 aaPredicted RBP26.57■■□□□ 1.84
CDR2-202ENST00000561630 XPNPEP1Q9NQW7 623 aa26.57■■□□□ 1.84
CDR2-202ENST00000561630 DACT1Q9NYF0 836 aa26.57■■□□□ 1.84
CDR2-202ENST00000561630 SMC3Q9UQE7 1217 aa26.57■■□□□ 1.84
CDR2-202ENST00000561630 ASAP2O43150 1006 aa26.56■■□□□ 1.84
CDR2-202ENST00000561630 DGAT1O75907 488 aa26.56■■□□□ 1.84
CDR2-202ENST00000561630 RARRES1P49788 294 aa26.56■■□□□ 1.84
CDR2-202ENST00000561630 MCTP1Q6DN14 999 aa26.56■■□□□ 1.84
CDR2-202ENST00000561630 ECHDC2Q86YB7 292 aa26.56■■□□□ 1.84
CDR2-202ENST00000561630 ERMNQ8TAM6 284 aa26.56■■□□□ 1.84
CDR2-202ENST00000561630 PCDHB6Q9Y5E3 794 aa26.56■■□□□ 1.84
CDR2-202ENST00000561630 TTC28Q96AY4 2481 aa26.55■■□□□ 1.84
CDR2-202ENST00000561630 A0A0U1RQF3 1178 aa26.55■■□□□ 1.84
CDR2-202ENST00000561630 TBKBP1A7MCY6 615 aa26.55■■□□□ 1.84
CDR2-202ENST00000561630 MED24O75448 989 aa26.55■■□□□ 1.84
CDR2-202ENST00000561630 SRGAP2CP0DJJ0 459 aa26.55■■□□□ 1.84
CDR2-202ENST00000561630 FGFR1P11362 822 aa26.55■■□□□ 1.84
CDR2-202ENST00000561630 FXR2P51116 673 aaKnown RBP eCLIP26.55■■□□□ 1.843e-8■■■■■ 33.1
CDR2-202ENST00000561630 MRPS5P82675 430 aaKnown RBP26.55■■□□□ 1.84
CDR2-202ENST00000561630 TJAP1Q5JTD0 557 aa26.55■■□□□ 1.84
CDR2-202ENST00000561630 FERMT3Q86UX7 667 aa26.55■■□□□ 1.84
CDR2-202ENST00000561630 CCDC43Q96MW1 224 aaKnown RBP26.55■■□□□ 1.84
CDR2-202ENST00000561630 TRAIPQ9BWF2 469 aa26.55■■□□□ 1.84
CDR2-202ENST00000561630 COG5Q9UP83 839 aa26.55■■□□□ 1.84
CDR2-202ENST00000561630 H3BQV1 296 aa26.54■■□□□ 1.84
CDR2-202ENST00000561630 HOXA2O43364 376 aa26.54■■□□□ 1.84
CDR2-202ENST00000561630 RPA1P27694 616 aa26.54■■□□□ 1.84
CDR2-202ENST00000561630 PTGDRQ13258 359 aa26.54■■□□□ 1.84
CDR2-202ENST00000561630 CATSPER4Q7RTX7 472 aa26.54■■□□□ 1.84
CDR2-202ENST00000561630 SRGAP1Q7Z6B7 1085 aa26.54■■□□□ 1.84
CDR2-202ENST00000561630 P2RX5Q93086 422 aa26.54■■□□□ 1.84
CDR2-202ENST00000561630 ASB2Q96Q27 587 aa26.54■■□□□ 1.84
CDR2-202ENST00000561630 COL25A1Q9BXS0 654 aaPredicted RBP26.54■■□□□ 1.84
CDR2-202ENST00000561630 LMAN2LQ9H0V9 348 aa26.54■■□□□ 1.84
CDR2-202ENST00000561630 A0A087WWV3 80 aa26.53■■□□□ 1.84
CDR2-202ENST00000561630 EOMESO95936 686 aa26.53■■□□□ 1.84
CDR2-202ENST00000561630 MXD4Q14582 209 aaPredicted RBP26.53■■□□□ 1.84
CDR2-202ENST00000561630 TIGD5Q53EQ6 642 aa26.53■■□□□ 1.84
CDR2-202ENST00000561630 NAALADL2Q58DX5 795 aa26.53■■□□□ 1.84
CDR2-202ENST00000561630 RILPL1Q5EBL4 403 aa26.53■■□□□ 1.84
CDR2-202ENST00000561630 ZNF598Q86UK7 904 aaKnown RBP26.53■■□□□ 1.84
CDR2-202ENST00000561630 RNF149Q8NC42 400 aa26.53■■□□□ 1.84
CDR2-202ENST00000561630 NACC1Q96RE7 527 aa26.53■■□□□ 1.84
CDR2-202ENST00000561630 TMEM117Q9H0C3 514 aa26.53■■□□□ 1.84
CDR2-202ENST00000561630 RNF19AQ9NV58 838 aa26.53■■□□□ 1.84
CDR2-202ENST00000561630 DBR1Q9UK59 544 aaKnown RBP26.53■■□□□ 1.84
CDR2-202ENST00000561630 PIN4Q9Y237 131 aaKnown RBP26.53■■□□□ 1.84
CDR2-202ENST00000561630 LAD1O00515 517 aa26.52■■□□□ 1.84
CDR2-202ENST00000561630 GRM6O15303 877 aa26.52■■□□□ 1.84
CDR2-202ENST00000561630 CUL4AQ13619 759 aa26.52■■□□□ 1.84
CDR2-202ENST00000561630 PDIA5Q14554 519 aa26.52■■□□□ 1.84
CDR2-202ENST00000561630 HLA-CQ95604 372 aa26.52■■□□□ 1.84
CDR2-202ENST00000561630 CASD1Q96PB1 797 aa26.52■■□□□ 1.84
CDR2-202ENST00000561630 MINDY3Q9H8M7 445 aa26.52■■□□□ 1.84
CDR2-202ENST00000561630 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.52■■□□□ 1.84
CDR2-202ENST00000561630 PLAGL2Q9UPG8 496 aa26.52■■□□□ 1.84
CDR2-202ENST00000561630 RALGAPA2Q2PPJ7 1873 aa26.51■■□□□ 1.83
CDR2-202ENST00000561630 MUTP22033 750 aa26.51■■□□□ 1.83
CDR2-202ENST00000561630 ARL2P36404 184 aa26.51■■□□□ 1.83
CDR2-202ENST00000561630 TFF2Q03403 129 aa26.51■■□□□ 1.83
CDR2-202ENST00000561630 LARP1BQ659C4 914 aaKnown RBP26.51■■□□□ 1.83
CDR2-202ENST00000561630 HAUS3Q68CZ6 603 aa26.51■■□□□ 1.83
CDR2-202ENST00000561630 TWF2Q6IBS0 349 aaKnown RBP26.51■■□□□ 1.83
CDR2-202ENST00000561630 POTEGQ6S5H5 508 aa26.51■■□□□ 1.83
CDR2-202ENST00000561630 SYMPKQ92797 1274 aaKnown RBP26.51■■□□□ 1.83
CDR2-202ENST00000561630 ALG13Q9NP73 1137 aaKnown RBP26.51■■□□□ 1.83
CDR2-202ENST00000561630 AGPAT5Q9NUQ2 364 aa26.51■■□□□ 1.83
CDR2-202ENST00000561630 TYW1Q9NV66 732 aaKnown RBP26.51■■□□□ 1.83
CDR2-202ENST00000561630 LRWD1Q9UFC0 647 aa26.51■■□□□ 1.83
CDR2-202ENST00000561630 ATF7P17544 494 aaPredicted RBP26.5■■□□□ 1.83
CDR2-202ENST00000561630 PRPHP41219 470 aa26.5■■□□□ 1.83
CDR2-202ENST00000561630 PHKA2P46019 1235 aa26.5■■□□□ 1.83
CDR2-202ENST00000561630 POU5F1BQ06416 359 aa26.5■■□□□ 1.83
CDR2-202ENST00000561630 AAK1Q2M2I8 961 aa26.5■■□□□ 1.83
CDR2-202ENST00000561630 IGSF22Q8N9C0 903 aa26.5■■□□□ 1.83
CDR2-202ENST00000561630 KLHL23Q8NBE8 558 aa26.5■■□□□ 1.83
CDR2-202ENST00000561630 RNF169Q8NCN4 708 aa26.5■■□□□ 1.83
CDR2-202ENST00000561630 ASAP3Q8TDY4 903 aa26.5■■□□□ 1.83
CDR2-202ENST00000561630 USO1O60763 962 aaKnown RBP26.49■■□□□ 1.83
CDR2-202ENST00000561630 ITGB1P05556 798 aa26.49■■□□□ 1.83
CDR2-202ENST00000561630 PTENP60484 403 aa26.49■■□□□ 1.83
CDR2-202ENST00000561630 TFDP1Q14186 410 aa26.49■■□□□ 1.83
CDR2-202ENST00000561630 CLLU1OSQ5K130 101 aa26.49■■□□□ 1.83
CDR2-202ENST00000561630 ABI1Q8IZP0 508 aa26.49■■□□□ 1.83
CDR2-202ENST00000561630 SPPL3Q8TCT6 385 aa26.49■■□□□ 1.83
CDR2-202ENST00000561630 RAB34Q9BZG1 259 aa26.49■■□□□ 1.83
CDR2-202ENST00000561630 NSUN3Q9H649 340 aaKnown RBP26.49■■□□□ 1.83
CDR2-202ENST00000561630 CWH43Q9H720 699 aa26.49■■□□□ 1.83
CDR2-202ENST00000561630 AAASQ9NRG9 546 aa26.49■■□□□ 1.83
CDR2-202ENST00000561630 HCSTQ9UBK5 93 aa26.49■■□□□ 1.83
CDR2-202ENST00000561630 PCDHB12Q9Y5F1 795 aa26.49■■□□□ 1.83
CDR2-202ENST00000561630 STK24Q9Y6E0 443 aa26.49■■□□□ 1.83
CDR2-202ENST00000561630 ZNF623O75123 536 aa26.48■■□□□ 1.83
CDR2-202ENST00000561630 SKIP12755 728 aa26.48■■□□□ 1.83
CDR2-202ENST00000561630 HOXA11P31270 313 aaPredicted RBP26.48■■□□□ 1.83
CDR2-202ENST00000561630 CCT6AP40227 531 aaKnown RBP26.48■■□□□ 1.83
CDR2-202ENST00000561630 CAMK1Q14012 370 aa26.48■■□□□ 1.83
CDR2-202ENST00000561630 PCBP1Q15365 356 aaKnown RBP eCLIP26.48■■□□□ 1.83
CDR2-202ENST00000561630 SPOUT1Q5T280 376 aaKnown RBP26.48■■□□□ 1.83
CDR2-202ENST00000561630 IFNLR1Q8IU57 520 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms