RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 RAD17O75943 681 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 NR3C1P04150 777 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 PGM1P36871 562 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 FXR1P51114 621 aaKnown RBP eCLIP10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 OLFML2BQ68BL8 750 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 LRRC31Q6UY01 552 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 MCF2L2Q86YR7 1114 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 PPM1NQ8N819 430 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 FBXL13Q8NEE6 735 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ZIM3Q96PE6 472 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ADPGKQ9BRR6 497 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ING2Q9H160 280 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 VPS11Q9H270 941 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 RBM12Q9NTZ6 932 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ADA2Q9NZK5 511 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ARL2BPQ9Y2Y0 163 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 KCNA3P22001 575 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 CHRNA3P32297 505 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 GCLMP48507 274 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ARPP19P56211 112 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 KDSRQ06136 332 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 LONRF1Q17RB8 773 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 MUM1L1Q5H9M0 696 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 FSCBQ5H9T9 825 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 RASSF3Q86WH2 238 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 MB21D2Q8IYB1 491 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 C7orf31Q8N865 590 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 PRPF31Q8WWY3 499 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 RAD54LQ92698 747 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 STRBPQ96SI9 672 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 LY9Q9HBG7 655 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ATP7AQ04656 1500 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 PPP1R12AO14974 1030 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ENO1P06733 434 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ZNF394Q53GI3 561 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 PDXDC1Q6P996 788 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 RASGRP2Q7LDG7 609 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 TRIM59Q8IWR1 403 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 RNPC3Q96LT9 517 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 TRIM15Q9C019 465 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 CCDC90BQ9GZT6 254 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 PSD3Q9NYI0 1048 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 STRIP2Q9ULQ0 834 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 TFR2Q9UP52 801 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 IQCA1LA6NCM1 817 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 ZRANB2O95218 330 aaKnown RBP eCLIP10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 GPS1Q13098 491 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 TC2NQ8N9U0 490 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 SNF8Q96H20 258 aa10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 EIF2AQ9BY44 585 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-202ENST00000561623 MAGI3Q5TCQ9 1506 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 A0A1B0GTH6 734 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 GOLGA8RI6L899 631 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 ZNF157P51786 506 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 ALDH18A1P54886 795 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 YWHAHQ04917 246 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 TXNRD1Q16881 649 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 PIK3R5Q8WYR1 880 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 IGSF1Q8N6C5 1336 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 CLRN2A0PK11 232 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 MAN1A2O60476 641 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 HSPA8P11142 646 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 MKRN4PQ13434 485 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 KLHL38Q2WGJ6 581 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 NYAP1Q6ZVC0 841 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 AGR3Q8TD06 166 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 BTBD6Q96KE9 485 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 ADAM22Q9P0K1 906 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 ARHGAP10A1A4S6 786 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 SEC24DO94855 1032 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 CYP2D6P10635 497 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 ZNF18P17022 549 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 GLYCTKQ8IVS8 523 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 HPS3Q969F9 1004 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 PNKPQ96T60 521 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 GTSE1Q9NYZ3 720 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 STK36Q9NRP7 1315 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 RNF103-CHMP3A0A140T963 221 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 FAM187AA6NFU0 413 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 TLR3O15455 904 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 FTLP02792 175 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 UBTFL6P0CB48 400 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 KANSL2Q9H9L4 492 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 FHOD1Q9Y613 1164 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 ATP10DQ9P241 1426 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 SYCE1LA8MT33 242 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 H3BRJ5 948 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 PFDN6O15212 129 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 CAV1Q03135 178 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 KRT17Q04695 432 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 CUL3Q13618 768 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 DRAP1Q14919 205 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 ERICH1Q86X53 443 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 PRPF38AQ8NAV1 312 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 PARD3BQ8TEW8 1205 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 TTC25Q96NG3 672 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 NPHS2Q9NP85 383 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 GUCY1A2P33402 732 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 KLC1Q07866 573 aa10.88□□□□□ -0.67
GTF3C1-202ENST00000561623 CCDC92Q53HC0 331 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms