RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	NCKAP1L	P55160	1127 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	SESN3	P58005	492 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	FAP	Q12884	760 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	IDI1	Q13907	227 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	ZXDC	Q2QGD7	858 aa	Predicted RBP	5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	GORAB	Q5T7V8	394 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	BROX	Q5VW32	411 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	FSTL4	Q6MZW2	842 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	NECAB2	Q7Z6G3	386 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	ZZZ3	Q8IYH5	903 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	RPUSD2	Q8IZ73	545 aa	Known RBP	5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	COG1	Q8WTW3	980 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	DACT3	Q96B18	629 aa	Predicted RBP	5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	GBP4	Q96PP9	640 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	SMAD5	Q99717	465 aa	Known RBP	5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	KCNG1	Q9UIX4	513 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	TELO2	Q9Y4R8	837 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	MYO5B	Q9ULV0	1848 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	NUP155	O75694	1391 aa		5.24	□□□□□ -1.57
LRRC28-222	ENST00000561431	TRPM2	O94759	1503 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	CFAP65	Q6ZU64	1925 aa	Known RBP	5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	HRK	O00198	91 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	APOL3	O95236	402 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	ASGR2	P07307	311 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	MME	P08473	750 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	PDGFRB	P09619	1106 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	PTMS	P20962	102 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	CD40	P25942	277 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	SEC23A	Q15436	765 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	RGL3	Q3MIN7	710 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	VASN	Q6EMK4	673 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	NME9	Q86XW9	330 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	TTLL11	Q8NHH1	800 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	E2F7	Q96AV8	911 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	AHCYL2	Q96HN2	611 aa	Known RBP	5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	PUS7L	Q9H0K6	701 aa	Known RBP	5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	NWD1	Q149M9	1564 aa		5.23	□□□□□ -1.57
LRRC28-222	ENST00000561431	PRAMEF22	A3QJZ6	481 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	ACOT7	O00154	380 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	DVL2	O14641	736 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	C4BPA	P04003	597 aa	Known RBP	5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	CENPB	P07199	599 aa	Predicted RBP	5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	ENO2	P09104	434 aa	Predicted RBP	5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	CYP2C8	P10632	490 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	PTX3	P26022	381 aa	Predicted RBP	5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	AFF3	P51826	1226 aa	Known RBP	5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	HERVK_113	P62684	666 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	EXOSC10	Q01780	885 aa	Known RBP	5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	ADCY1	Q08828	1119 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	EFEMP1	Q12805	493 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	BRDT	Q58F21	947 aa	Predicted RBP	5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	CCDC181	Q5TID7	509 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	PRAMEF18	Q5VWM3	479 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	ERICH6B	Q5W0A0	696 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	TIGD7	Q6NT04	549 aa	Predicted RBP	5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	TEPP	Q6URK8	271 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	TMC5	Q6UXY8	1006 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	LDHD	Q86WU2	507 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	ZDHHC14	Q8IZN3	488 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	FAM26E	Q8N5C1	309 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	CNTD1	Q8N815	330 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	C7orf31	Q8N865	590 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	DLG3	Q92796	817 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	SIGLEC10	Q96LC7	697 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	TUBGCP5	Q96RT8	1024 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	TYW1	Q9NV66	732 aa	Known RBP	5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	SLC52A1	Q9NWF4	448 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	XIRP1	Q702N8	1843 aa	Known RBP	5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	NRXN3	Q9Y4C0	1643 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	LRRC7	Q96NW7	1537 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	WASHC2A	Q641Q2	1341 aa		5.22	□□□□□ -1.57
LRRC28-222	ENST00000561431	GOLGA8A	A7E2F4	631 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	GOLGA8B	A8MQT2	603 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	HMGB1P1	B2RPK0	211 aa	Predicted RBP	5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	LRG1	P02750	347 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	CCND1	P24385	295 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	MC3R	P41968	323 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	CACNB2	Q08289	660 aa	Predicted RBP	5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	DBP	Q10586	325 aa	Predicted RBP	5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	FRMD7	Q6ZUT3	714 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	MIB1	Q86YT6	1006 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	ASB15	Q8WXK1	588 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	RTF1	Q92541	710 aa	Known RBP	5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	RNF38	Q9H0F5	515 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	METTL14	Q9HCE5	456 aa	Known RBP	5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	SLC39A2	Q9NP94	309 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	UCKL1	Q9NWZ5	548 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	MBD1	Q9UIS9	605 aa	Predicted RBP	5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	PLA2G2D	Q9UNK4	145 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	IRAK3	Q9Y616	596 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	NEXMIF	Q5QGS0	1516 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	RIMS2	Q9UQ26	1411 aa		5.21	□□□□□ -1.58
LRRC28-222	ENST00000561431	PLEKHG1	Q9ULL1	1385 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	UBA6	A0AVT1	1052 aa	Predicted RBP	5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	TGM5	O43548	720 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	KDM1A	O60341	852 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	PRKD3	O94806	890 aa		5.2	□□□□□ -1.58
LRRC28-222	ENST00000561431	FBXO21	O94952	628 aa		5.2	□□□□□ -1.58

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