RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 DHX34Q14147 1143 aaKnown RBP14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 EFTUD2Q15029 972 aaKnown RBP eCLIP14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 ANGPTL8Q6UXH0 198 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 CATSPER4Q7RTX7 472 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 HEMGNQ9BXL5 484 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 COA1Q9GZY4 146 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 GTSE1Q9NYZ3 720 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 ARHGAP31Q2M1Z3 1444 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 ARID5BQ14865 1188 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 ELMSAN1Q6PJG2 1045 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 SFR1Q86XK3 245 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 THNSL1Q8IYQ7 743 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 EXT2Q93063 718 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 ULK4Q96C45 1275 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 DYDC2Q96IM9 177 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 NLRP4Q96MN2 994 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 ACAP3Q96P50 834 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 GCNAQ96QF7 691 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 BSDC1Q9NW68 430 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 DDX56Q9NY93 547 aaKnown RBP14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 FBXO40Q9UH90 709 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 IP6K2Q9UHH9 426 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 PLEKHA8P1O95397 391 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 PRELPP51888 382 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 KRT76Q01546 638 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 KNOP1Q1ED39 458 aaKnown RBP14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 NOP9Q86U38 636 aaKnown RBP14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 RHOT1Q8IXI2 618 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 PPM1NQ8N819 430 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 ZNF564Q8TBZ8 553 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 RAD54LQ92698 747 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 FSD1LQ9BXM9 530 aa14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 TRIM45Q9H8W5 580 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P11-201ENST00000560634 ARHGEF9O43307 516 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 SRGAP2O75044 1071 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 PRCPP42785 496 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 RECQLP46063 649 aaPredicted RBP14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 NUDCD3Q8IVD9 361 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 CATSPER1Q8NEC5 780 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 SEPT8Q92599 483 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 DACH2Q96NX9 599 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 SMYD3Q9H7B4 428 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 ATP7AQ04656 1500 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 ANP32DO95626 131 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 ITPRIPL1Q6GPH6 555 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 ARHGAP27Q6ZUM4 889 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 KRT27Q7Z3Y8 459 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 PODNQ7Z5L7 613 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 THEM5Q8N1Q8 247 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 COG1Q8WTW3 980 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 TGS1Q96RS0 853 aaKnown RBP14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 PCDHA6Q9UN73 950 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 PCDHA8Q9Y5H6 950 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 UBE4BO95155 1302 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 PI4K2BG5E9Z4 385 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 H7C1W4 665 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 KIF1CO43896 1103 aaKnown RBP14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 GCLMP48507 274 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 FLOT2Q14254 428 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 ERFEQ4G0M1 354 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 PADI6Q6TGC4 694 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 SIRT2Q8IXJ6 389 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 ICA1LQ8NDH6 482 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 STX18Q9P2W9 335 aaKnown RBP14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 GYS2P54840 703 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 ARPP19P56211 112 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 CAPRIN1Q14444 709 aaKnown RBP14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 ZNF699Q32M78 642 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 KIRREL3Q8IZU9 778 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 CCNYL1Q8N7R7 359 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 GFM2Q969S9 779 aaKnown RBP14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 THOC1Q96FV9 657 aaKnown RBP14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 C11orf70Q9BRQ4 267 aa14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 KDM5AP29375 1690 aaKnown RBP14.05□□□□□ -0.16
CSPG4P11-201ENST00000560634 SLC10A5Q5PT55 438 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 CDKL3Q8IVW4 592 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 FAM161BQ96MY7 647 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 WWP1Q9H0M0 922 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 CYP2D7A0A087X1C5 515 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 GTPBP10A4D1E9 387 aaKnown RBP14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 HOXA13P31271 388 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 STAT4Q14765 748 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 KIAA1755Q5JYT7 1200 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 TMEM270Q6UE05 265 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 LZICQ8WZA0 190 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 DDX17Q92841 729 aaKnown RBP14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 SNF8Q96H20 258 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 NAF1Q96HR8 494 aaKnown RBP14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 HEY1Q9Y5J3 304 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 HEG1Q9ULI3 1381 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 CLASP1Q7Z460 1538 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 E9PMD0 336 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 ZFXP17010 805 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 BCAR1P56945 870 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 TAP1Q03518 808 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 GFPT1Q06210 699 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 TOB2Q14106 344 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 IMPG1Q17R60 797 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 Q3C1V9 767 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 RARS2Q5T160 578 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms