RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.02	□□□□□ -0.8
NEO1-208	ENST00000560328	MIF4GD	A9UHW6	222 aa	Known RBP	10.02	□□□□□ -0.8
NEO1-208	ENST00000560328	CASP7	P55210	303 aa		10.02	□□□□□ -0.8
NEO1-208	ENST00000560328	SLMAP	Q14BN4	828 aa		10.02	□□□□□ -0.8
NEO1-208	ENST00000560328	SPDYE2	Q495Y8	402 aa		10.02	□□□□□ -0.8
NEO1-208	ENST00000560328	DNAAF3	Q8N9W5	541 aa		10.02	□□□□□ -0.8
NEO1-208	ENST00000560328	WHAMM	Q8TF30	809 aa		10.02	□□□□□ -0.8
NEO1-208	ENST00000560328	CCDC68	Q9H2F9	335 aa		10.02	□□□□□ -0.8
NEO1-208	ENST00000560328	RBAK	Q9NYW8	714 aa	Predicted RBP	10.02	□□□□□ -0.8
NEO1-208	ENST00000560328	TUBE1	Q9UJT0	475 aa		10.02	□□□□□ -0.8
NEO1-208	ENST00000560328	NR3C2	P08235	984 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	SRGAP2B	P0DMP2	458 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	TBXAS1	P24557	533 aa	Predicted RBP	10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	STK4	Q13043	487 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	BBS5	Q8N3I7	341 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	LRRC8C	Q8TDW0	803 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	FMO2	Q99518	471 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	C11orf70	Q9BRQ4	267 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	SALL3	Q9BXA9	1300 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	ANO9	A1A5B4	782 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	CCDC188	H7C350	402 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	RASSF2	P50749	326 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	KCNV1	Q6PIU1	500 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	AGBL3	Q8NEM8	1001 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	RNF139	Q8WU17	664 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	IPO11	Q9UI26	975 aa	Known RBP	10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	NFU1	Q9UMS0	254 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	FAN1	Q9Y2M0	1017 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	SLIT1	O75093	1534 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	UBE2Q2L	H0YL09	131 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	PFDN6	O15212	129 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	FTL	P02792	175 aa	Predicted RBP	10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	ANXA13	P27216	316 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	SLCO1A2	P46721	670 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	EP400NL	Q6ZTU2	488 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	SPATA24	Q86W54	205 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	ECE1	P42892	770 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	PDXDC1	Q6P996	788 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	ADGRA1	Q86SQ6	560 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	BEST2	Q8NFU1	509 aa		10.02	□□□□□ -0.81
NEO1-208	ENST00000560328	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.02	□□□□□ -0.81
NEO1-208	ENST00000560328		A0A1B0GTH6	734 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	TJP3	O95049	919 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	MSH2	P43246	934 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	IL9R	Q01113	521 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	GRIN1	Q05586	938 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	CASP8	Q14790	479 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	TKFC	Q3LXA3	575 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	RNF10	Q8N5U6	811 aa	Known RBP	10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	RNF149	Q8NC42	400 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	FBXL13	Q8NEE6	735 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	SLC16A10	Q8TF71	515 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	PRMT6	Q96LA8	375 aa	Predicted RBP	10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	AGBL1	Q96MI9	1066 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	INPP5F	Q9Y2H2	1132 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	COL5A2	P05997	1499 aa	Predicted RBP	10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	TYW5	A2RUC4	315 aa	Known RBP	10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	CTNND1	O60716	968 aa	Known RBP	10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	HUS1	O60921	280 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	CALB1	P05937	261 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	RPS12	P25398	132 aa	Known RBP	10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	GNA15	P30679	374 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	CUL1	Q13616	776 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	TMED2	Q15363	201 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	XKR3	Q5GH77	459 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	NXN	Q6DKJ4	435 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	FBXO38	Q6PIJ6	1188 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	GLYCTK	Q8IVS8	523 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	RSRC1	Q96IZ7	334 aa	Known RBP	10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	CFAP57	Q96MR6	1250 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	HEMGN	Q9BXL5	484 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	MROH1	Q8NDA8	1641 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	FER1L4	A9Z1Z3	1794 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	NCK2	O43639	380 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	GGPS1	O95749	300 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	NFIA	Q12857	509 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	TIPIN	Q9BVW5	301 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	NUP85	Q9BW27	656 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	GCOM2	Q9BZD3	368 aa	Predicted RBP	10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	STK38L	Q9Y2H1	464 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	NWD1	Q149M9	1564 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	DGAT1	O75907	488 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	RFX1	P22670	979 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	SOX5	P35711	763 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	MTF1	Q14872	753 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	ARL13B	Q3SXY8	428 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	C4orf50	Q6ZRC1	276 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	C3orf67	Q6ZVT6	689 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	ZNF564	Q8TBZ8	553 aa	Predicted RBP	10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	TBK1	Q9UHD2	729 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	CPSF3	Q9UKF6	684 aa	Known RBP	10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	UBE4B	O95155	1302 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	SYNGAP1	Q96PV0	1343 aa		10.01	□□□□□ -0.81
NEO1-208	ENST00000560328	ESYT2	A0FGR8	921 aa		10	□□□□□ -0.81
NEO1-208	ENST00000560328	SLC16A3	O15427	465 aa	Known RBP	10	□□□□□ -0.81
NEO1-208	ENST00000560328	ZBED1	O96006	694 aa		10	□□□□□ -0.81
NEO1-208	ENST00000560328	EFNA5	P52803	228 aa		10	□□□□□ -0.81

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