RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 PCDHA6Q9UN73 950 aa7.03□□□□□ -1.28
CLPX-206ENST00000560166 INPP5FQ9Y2H2 1132 aa7.03□□□□□ -1.28
CLPX-206ENST00000560166 SLC45A1Q9Y2W3 748 aa7.03□□□□□ -1.28
CLPX-206ENST00000560166 MRPL11Q9Y3B7 192 aaKnown RBP7.03□□□□□ -1.28
CLPX-206ENST00000560166 RABGAP1Q9Y3P9 1069 aa7.03□□□□□ -1.28
CLPX-206ENST00000560166 PCDHA8Q9Y5H6 950 aa7.03□□□□□ -1.28
CLPX-206ENST00000560166 DDX49Q9Y6V7 483 aaKnown RBP7.03□□□□□ -1.28
CLPX-206ENST00000560166 TRIOBPQ9H2D6 2365 aa7.03□□□□□ -1.28
CLPX-206ENST00000560166 GOLGA6L4A6NEF3 574 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 IGF2BP3O00425 579 aaKnown RBP eCLIP7.02□□□□□ -1.29
CLPX-206ENST00000560166 ZBED4O75132 1171 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 FLOT1O75955 427 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 ZBTB48P10074 688 aaPredicted RBP7.02□□□□□ -1.29
CLPX-206ENST00000560166 DNAJA1P31689 397 aaKnown RBP7.02□□□□□ -1.29
CLPX-206ENST00000560166 COPB2P35606 906 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 PRPHP41219 470 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 TOB1P50616 345 aaPredicted RBP7.02□□□□□ -1.29
CLPX-206ENST00000560166 USP11P51784 963 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 HMGCS2P54868 508 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 INHBEP58166 350 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 CRHR2Q13324 411 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 GRM2Q14416 872 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 COG2Q14746 738 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 TTC38Q5R3I4 469 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 PPP4R3AQ6IN85 833 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 PSAPL1Q6NUJ1 521 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 CATSPERGQ6ZRH7 1159 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 PIK3AP1Q6ZUJ8 805 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 Q7L0L9 218 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 FASTKD5Q7L8L6 764 aaKnown RBP7.02□□□□□ -1.29
CLPX-206ENST00000560166 MCF2L2Q86YR7 1114 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 DEFB123Q8N688 67 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 SLC43A3Q8NBI5 491 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 KRTAP4-11Q9BYQ6 195 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 UBE2OQ9C0C9 1292 aaKnown RBP7.02□□□□□ -1.29
CLPX-206ENST00000560166 EHMT1Q9H9B1 1298 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.02□□□□□ -1.29
CLPX-206ENST00000560166 FZD1Q9UP38 647 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 AGTPBP1Q9UPW5 1226 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 NR2E3Q9Y5X4 410 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 KIAA0100Q14667 2235 aaKnown RBP7.02□□□□□ -1.29
CLPX-206ENST00000560166 SZT2Q5T011 3432 aa7.02□□□□□ -1.29
CLPX-206ENST00000560166 ZNF536O15090 1300 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 CYP3A7-CYP3A51PA0A087WV96 503 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 VWA5AO00534 786 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 CUTAO60888 179 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 LETM1O95202 739 aaPredicted RBP7.01□□□□□ -1.29
CLPX-206ENST00000560166 CMA1P23946 247 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 CYP3A7P24462 503 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 ME1P48163 572 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 HSD17B4P51659 736 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 ATP2C1P98194 919 aaPredicted RBP7.01□□□□□ -1.29
CLPX-206ENST00000560166 SNAPC2Q13487 334 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 ZYXQ15942 572 aaKnown RBP7.01□□□□□ -1.29
CLPX-206ENST00000560166 NEK8Q86SG6 692 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 CCDC84Q86UT8 332 aaPredicted RBP7.01□□□□□ -1.29
CLPX-206ENST00000560166 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.01□□□□□ -1.29
CLPX-206ENST00000560166 REPS2Q8NFH8 660 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 CRYGNQ8WXF5 182 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 PIBF1Q8WXW3 757 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 BHMTQ93088 406 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 PMEPA1Q969W9 287 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 COA7Q96BR5 231 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 PYM1Q9BRP8 204 aaKnown RBP7.01□□□□□ -1.29
CLPX-206ENST00000560166 SRA1Q9HD15 236 aaKnown RBP7.01□□□□□ -1.29
CLPX-206ENST00000560166 ZCCHC17Q9NP64 241 aaKnown RBP7.01□□□□□ -1.29
CLPX-206ENST00000560166 LATS2Q9NRM7 1088 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 DDX19AQ9NUU7 478 aaKnown RBP7.01□□□□□ -1.29
CLPX-206ENST00000560166 FBXO28Q9NVF7 368 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 STXBP5LQ9Y2K9 1186 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 SRPRBQ9Y5M8 271 aaKnown RBP7.01□□□□□ -1.29
CLPX-206ENST00000560166 CLIC4Q9Y696 253 aa7.01□□□□□ -1.29
CLPX-206ENST00000560166 MYH4Q9Y623 1939 aa7□□□□□ -1.29
CLPX-206ENST00000560166 A0A1W2PPC1 479 aa7□□□□□ -1.29
CLPX-206ENST00000560166 GCOM1H8Y6P7 765 aaPredicted RBP7□□□□□ -1.29
CLPX-206ENST00000560166 MEIS2O14770 477 aa7□□□□□ -1.29
CLPX-206ENST00000560166 TBX3O15119 743 aa7□□□□□ -1.29
CLPX-206ENST00000560166 SLC26A4O43511 780 aa7□□□□□ -1.29
CLPX-206ENST00000560166 ADAMTS4O75173 837 aa7□□□□□ -1.29
CLPX-206ENST00000560166 RGS9O75916 674 aaPredicted RBP7□□□□□ -1.29
CLPX-206ENST00000560166 CYP3A4P08684 503 aa7□□□□□ -1.29
CLPX-206ENST00000560166 POLR2MP0CAP2 368 aa7□□□□□ -1.29
CLPX-206ENST00000560166 CETPP11597 493 aa7□□□□□ -1.29
CLPX-206ENST00000560166 TARSP26639 723 aaKnown RBP7□□□□□ -1.29
CLPX-206ENST00000560166 CIITAP33076 1130 aa7□□□□□ -1.29
CLPX-206ENST00000560166 LONP1P36776 959 aaKnown RBP7□□□□□ -1.29
CLPX-206ENST00000560166 SREBF1P36956 1147 aa7□□□□□ -1.29
CLPX-206ENST00000560166 ST13P50502 369 aaKnown RBP7□□□□□ -1.29
CLPX-206ENST00000560166 GTF2A2P52657 109 aa7□□□□□ -1.29
CLPX-206ENST00000560166 FAM160A1Q05DH4 1040 aa7□□□□□ -1.29
CLPX-206ENST00000560166 EARS2Q5JPH6 523 aaKnown RBP7□□□□□ -1.29
CLPX-206ENST00000560166 AXDND1Q5T1B0 1012 aaPredicted RBP7□□□□□ -1.29
CLPX-206ENST00000560166 XRRA1Q6P2D8 792 aa7□□□□□ -1.29
CLPX-206ENST00000560166 CCDC73Q6ZRK6 1079 aa7□□□□□ -1.29
CLPX-206ENST00000560166 ELOA2Q8IYF1 753 aaPredicted RBP7□□□□□ -1.29
CLPX-206ENST00000560166 CHST13Q8NET6 341 aa7□□□□□ -1.29
CLPX-206ENST00000560166 GPT2Q8TD30 523 aa7□□□□□ -1.29
CLPX-206ENST00000560166 TBCKQ8TEA7 893 aa7□□□□□ -1.29
CLPX-206ENST00000560166 MRPS27Q92552 414 aaKnown RBP7□□□□□ -1.29
CLPX-206ENST00000560166 DHX38Q92620 1227 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms