RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 DLGAP2Q9P1A6 1054 aa14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 CA14Q9ULX7 337 aa14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 AKT3Q9Y243 479 aa14.55□□□□□ -0.08
RABGGTA-213ENST00000560127 DCNP07585 359 aaKnown RBP14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 FGFR4P22455 802 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 CLCN4P51793 760 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 NUCB1Q02818 461 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 TBC1D8BQ0IIM8 1120 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 SPECC1Q5M775 1068 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 TYW1BQ6NUM6 668 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 MIS18BP1Q6P0N0 1132 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 ZC3H14Q6PJT7 736 aaKnown RBP14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 TRMT1LQ7Z2T5 733 aaKnown RBP14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 HEATR3Q7Z4Q2 680 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 CKAP2LQ8IYA6 745 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 CCDC82Q8N4S0 544 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 ANO3Q9BYT9 981 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 NRDE2Q9H7Z3 1164 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 MAFBQ9Y5Q3 323 aaPredicted RBP14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 FAM208BQ5VWN6 2430 aa14.54□□□□□ -0.08
RABGGTA-213ENST00000560127 RALGAPA1Q6GYQ0 2036 aa14.53□□□□□ -0.08
RABGGTA-213ENST00000560127 MAGEB2O15479 319 aa14.53□□□□□ -0.08
RABGGTA-213ENST00000560127 GALTP07902 379 aa14.53□□□□□ -0.08
RABGGTA-213ENST00000560127 RFX1P22670 979 aa14.53□□□□□ -0.08
RABGGTA-213ENST00000560127 IRX6P78412 446 aaPredicted RBP14.53□□□□□ -0.08
RABGGTA-213ENST00000560127 EFCAB12Q6NXP0 572 aa14.53□□□□□ -0.08
RABGGTA-213ENST00000560127 C15orf39Q6ZRI6 1047 aa14.53□□□□□ -0.08
RABGGTA-213ENST00000560127 RAB11FIP4Q86YS3 637 aa14.53□□□□□ -0.08
RABGGTA-213ENST00000560127 C1orf210Q8IVY1 113 aa14.53□□□□□ -0.08
RABGGTA-213ENST00000560127 LRRC71Q8N4P6 559 aa14.53□□□□□ -0.08
RABGGTA-213ENST00000560127 SUMF1Q8NBK3 374 aa14.53□□□□□ -0.08
RABGGTA-213ENST00000560127 KLHL5Q96PQ7 755 aa14.53□□□□□ -0.08
RABGGTA-213ENST00000560127 F5P12259 2224 aa14.52□□□□□ -0.08
RABGGTA-213ENST00000560127 SPDYE4A6NLX3 237 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 FAM86B1E9PN63 330 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 FOSP01100 380 aaPredicted RBP14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 CNPP09543 421 aaKnown RBP14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 FAM86B2P0C5J1 330 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 SRFP11831 508 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 DARSP14868 501 aaKnown RBP14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 SREBF1P36956 1147 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 GPC3P51654 580 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 WWC2Q6AWC2 1192 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 PHLDB3Q6NSJ2 640 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 TMTC3Q6ZXV5 915 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 NIPA1Q7RTP0 329 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 SLC44A3Q8N4M1 653 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 LPPQ93052 612 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 MAP7D2Q96T17 732 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 RIC8AQ9NPQ8 531 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 TBC1D13Q9NVG8 400 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 DACT1Q9NYF0 836 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 EPS15L1Q9UBC2 864 aa14.52□□□□□ -0.09
RABGGTA-213ENST00000560127 CEP295Q9C0D2 2601 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 TDRD15B5MCY1 1934 aaKnown RBP14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 POTEMA6NI47 508 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 MEIS3P2A8K0S8 358 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 SH2B2O14492 632 aaPredicted RBP14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 B4GALT3O60512 393 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 LILRB3O75022 631 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 CSDE1O75534 798 aaKnown RBP14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 GLULP15104 373 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 KLRC2P26717 231 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 TMOD1P28289 359 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 PHKA2P46019 1235 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 SLC11A1P49279 550 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 COL9A3Q14050 684 aaPredicted RBP14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 NONOQ15233 471 aaKnown RBP eCLIP14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 LONRF3Q496Y0 759 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 POTEGQ6S5H5 508 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 NFXL1Q6ZNB6 911 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 PLA2G4DQ86XP0 818 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 MAML2Q8IZL2 1156 aaPredicted RBP14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 ZNF710Q8N1W2 664 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 CMASQ8NFW8 434 aaPredicted RBP14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 GPR152Q8TDT2 470 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 MYADMQ96S97 322 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 EMILIN2Q9BXX0 1053 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 WDR6Q9NNW5 1121 aaKnown RBP14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 DNAJB4Q9UDY4 337 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 CEP131Q9UPN4 1083 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 SIT1Q9Y3P8 196 aa14.51□□□□□ -0.09
RABGGTA-213ENST00000560127 COL4A3Q01955 1670 aa14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 IGLV3-22A0A075B6J6 115 aa14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 CARNS1A5YM72 827 aa14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 CCDC69A6NI79 296 aa14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 IPO5O00410 1097 aaKnown RBP14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 PRC1O43663 620 aa14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 SSBP05455 408 aaKnown RBP eCLIP14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 GBP2P32456 591 aaPredicted RBP14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 ZNF76P36508 570 aa14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 ATXN1P54253 815 aaKnown RBP14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 NAPAP54920 295 aa14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 ZNF746Q6NUN9 644 aaPredicted RBP14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 CASC1Q6TDU7 716 aa14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 RSPH1Q8WYR4 309 aa14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 MTA3Q9BTC8 594 aa14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 TRAIPQ9BWF2 469 aa14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 ARHGEF3Q9NR81 526 aa14.5□□□□□ -0.09
RABGGTA-213ENST00000560127 GABBR1Q9UBS5 961 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms