RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 MCM6Q14566 821 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 RAB30Q15771 203 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 ODR4Q5SWX8 454 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 ZNF697Q5TEC3 545 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 SPRED2Q7Z698 418 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 LINC00301Q8NCQ3 95 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 LINC01599Q8WXQ3 324 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 TOP1MTQ969P6 601 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 SLC9A7Q96T83 725 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 YME1L1Q96TA2 773 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 RAD9AQ99638 391 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 TTYH1Q9H313 450 aaPredicted RBP9.5□□□□□ -0.89
USP3-217ENST00000560070 ZNF576Q9H609 170 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 MINDY3Q9H8M7 445 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 MTUS1Q9ULD2 1270 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 LRFN2Q9ULH4 789 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 USP20Q9Y2K6 914 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 PPME1Q9Y570 386 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 PCDHA11Q9Y5I1 949 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 SQORQ9Y6N5 450 aa9.5□□□□□ -0.89
USP3-217ENST00000560070 INO80B-WBP1J3KQ70 363 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 GAS2O43903 313 aaKnown RBP9.49□□□□□ -0.89
USP3-217ENST00000560070 GJB5O95377 273 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 BRD1O95696 1058 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 PDIA4P13667 645 aaKnown RBP9.49□□□□□ -0.89
USP3-217ENST00000560070 PLCG1P19174 1290 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 MUTP22033 750 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 CAPSQ13938 189 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 TFDP1Q14186 410 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 MXD4Q14582 209 aaPredicted RBP9.49□□□□□ -0.89
USP3-217ENST00000560070 GRIN2CQ14957 1233 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 PAN2Q504Q3 1202 aaKnown RBP9.49□□□□□ -0.89
USP3-217ENST00000560070 PPP2R2DQ66LE6 453 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 RINT1Q6NUQ1 792 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 ZNF410Q86VK4 478 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 KRI1Q8N9T8 703 aaKnown RBP9.49□□□□□ -0.89
USP3-217ENST00000560070 ARNTL2Q8WYA1 636 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 BSNDQ8WZ55 320 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 SYMPKQ92797 1274 aaKnown RBP9.49□□□□□ -0.89
USP3-217ENST00000560070 CPB2Q96IY4 423 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 AK8Q96MA6 479 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 RUSC1Q9BVN2 902 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 FTHL17Q9BXU8 183 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 INO80BQ9C086 356 aaPredicted RBP9.49□□□□□ -0.89
USP3-217ENST00000560070 PRDM12Q9H4Q4 367 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 IFT122Q9HBG6 1241 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 RGS18Q9NS28 235 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 PIN4Q9Y237 131 aaKnown RBP9.49□□□□□ -0.89
USP3-217ENST00000560070 PCDHB7Q9Y5E2 793 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 SCN10AQ9Y5Y9 1956 aa9.49□□□□□ -0.89
USP3-217ENST00000560070 ALPK3Q96L96 1907 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.48□□□□□ -0.89
USP3-217ENST00000560070 CCDC169A6NNP5 214 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 HIP1RO75146 1068 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 FGFR1P11362 822 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 IGFBP4P22692 258 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 SFPQP23246 707 aaKnown RBP eCLIP9.48□□□□□ -0.89
USP3-217ENST00000560070 PHKA2P46019 1235 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 ME1P48163 572 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 NASPP49321 788 aaPredicted RBP9.48□□□□□ -0.89
USP3-217ENST00000560070 DSC3Q14574 896 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 TMEM132AQ24JP5 1023 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 TMEM119Q4V9L6 283 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 HYIQ5T013 277 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 RRAGBQ5VZM2 374 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 C1orf186Q6ZWK4 172 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 SLC24A5Q71RS6 500 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 SRGAP1Q7Z6B7 1085 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 GPBP1Q86WP2 473 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 CDR2LQ86X02 465 aaPredicted RBP9.48□□□□□ -0.89
USP3-217ENST00000560070 PDILTQ8N807 584 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 SYT2Q8N9I0 419 aaPredicted RBP9.48□□□□□ -0.89
USP3-217ENST00000560070 MCPH1Q8NEM0 835 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 DEPTORQ8TB45 409 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 LRRC15Q8TF66 581 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 MYLIPQ8WY64 445 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 IFT74Q96LB3 600 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 KIFC3Q9BVG8 833 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 NT5C3AQ9H0P0 336 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 TSPYL2Q9H2G4 693 aaPredicted RBP9.48□□□□□ -0.89
USP3-217ENST00000560070 ZHX3Q9H4I2 956 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 MTMR10Q9NXD2 777 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 INSL6Q9Y581 213 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 KIAA1217Q5T5P2 1943 aa9.48□□□□□ -0.89
USP3-217ENST00000560070 DNAH12Q6ZR08 3092 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 TBKBP1A7MCY6 615 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 C9IYK1 514 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 B4GALT5O43286 388 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 ERLIN2O94905 339 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 KRT18P05783 430 aaKnown RBP9.47□□□□□ -0.89
USP3-217ENST00000560070 STAG3L1P0CL83 205 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 DDIT3P35638 169 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 SARSP49591 514 aaKnown RBP9.47□□□□□ -0.89
USP3-217ENST00000560070 SLC12A3P55017 1021 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 PEX3P56589 373 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 PTENP60484 403 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 TAP1Q03518 808 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 NCBP1Q09161 790 aaKnown RBP9.47□□□□□ -0.89
USP3-217ENST00000560070 ARSHQ5FYA8 562 aa9.47□□□□□ -0.89
USP3-217ENST00000560070 SPOUT1Q5T280 376 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms