RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 UBE2HP62256 183 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 SETQ01105 290 aaPredicted RBP5.86□□□□□ -1.47
SPG11-220ENST00000559933 CTTNQ14247 550 aaKnown RBP5.86□□□□□ -1.47
SPG11-220ENST00000559933 OLFML2BQ68BL8 750 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 ATL3Q6DD88 541 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 TAPT1Q6NXT6 567 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 MOXD1Q6UVY6 613 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 MAMDC4Q6UXC1 1216 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 LINC00114Q6XXX2 140 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 CYFIP1Q7L576 1253 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 TRMT1LQ7Z2T5 733 aaKnown RBP5.86□□□□□ -1.47
SPG11-220ENST00000559933 SAMD3Q8N6K7 520 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 MORC4Q8TE76 937 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 SNX29Q8TEQ0 813 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 SH3TC2Q8TF17 1288 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 SOCS4Q8WXH5 440 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 MRPS27Q92552 414 aaKnown RBP5.86□□□□□ -1.47
SPG11-220ENST00000559933 STAMQ92783 540 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 DHX58Q96C10 678 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 GPRASP2Q96D09 838 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 DYDC2Q96IM9 177 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 PNMA5Q96PV4 448 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 SH2D3AQ9BRG2 576 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 TINF2Q9BSI4 451 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 TEKT3Q9BXF9 490 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 GZF1Q9H116 711 aaPredicted RBP5.86□□□□□ -1.47
SPG11-220ENST00000559933 SAGE1Q9NXZ1 904 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 RGL1Q9NZL6 768 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 ADD3Q9UEY8 706 aaKnown RBP5.86□□□□□ -1.47
SPG11-220ENST00000559933 KLF15Q9UIH9 416 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 HPSEQ9Y251 543 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 PTCH2Q9Y6C5 1203 aa5.86□□□□□ -1.47
SPG11-220ENST00000559933 SYNGAP1Q96PV0 1343 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 MYADML2A6NDP7 307 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 GOLGA6L4A6NEF3 574 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 ASB14A6NK59 587 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 GOLGA6L22H0YM25 854 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 EIF3JO75822 258 aaKnown RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 FARP2O94887 1054 aaPredicted RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 BMP15O95972 392 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 IGHA2P01877 340 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 ZNF865P0CJ78 1059 aaPredicted RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 TXNP10599 105 aaKnown RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 EPB42P16452 691 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 CCND3P30281 292 aaPredicted RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 PRPHP41219 470 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 PSMC6P62333 389 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 MAP2K1Q02750 393 aaPredicted RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 TYRO3Q06418 890 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 CACNB2Q08289 660 aaPredicted RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 TBC1D8BQ0IIM8 1120 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 GRB10Q13322 594 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 SNW1Q13573 536 aaKnown RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 ACVR2BQ13705 512 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 KIF22Q14807 665 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 CAMK4Q16566 473 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 TMEM266Q2M3C6 531 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 CCDC144BQ3MJ40 725 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 LONRF3Q496Y0 759 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 PLA2G4FQ68DD2 849 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 ADALQ6DHV7 355 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 MCTP2Q6DN12 878 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 CAVIN1Q6NZI2 390 aaKnown RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 B3GNT9Q6UX72 402 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 OTOP1Q7RTM1 612 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 NIPA1Q7RTP0 329 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 BTLAQ7Z6A9 289 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 NLRX1Q86UT6 975 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 CABP7Q86V35 215 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 CCDC60Q8IWA6 550 aaPredicted RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 FMR1NBQ8N0W7 255 aaPredicted RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 JMYQ8N9B5 988 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 IGSF22Q8N9C0 903 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 ENGASEQ8NFI3 743 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 FERMT2Q96AC1 680 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 ZBTB10Q96DT7 871 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 IWS1Q96ST2 819 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 SLC30A3Q99726 388 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 NAP1L4Q99733 375 aaKnown RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 SPOCK3Q9BQ16 436 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 EIF2AK1Q9BQI3 630 aaKnown RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 JPH1Q9HDC5 661 aaPredicted RBP5.85□□□□□ -1.47
SPG11-220ENST00000559933 DACT1Q9NYF0 836 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 TMEM63CQ9P1W3 806 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 LRWD1Q9UFC0 647 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 SRRDQ9UH36 339 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 HCN2Q9UL51 889 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 TRIM17Q9Y577 477 aa5.85□□□□□ -1.47
SPG11-220ENST00000559933 FRMPD3Q5JV73 1810 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 NPHP3-ACAD11A0A0J9YXS1 232 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 A0A1W2PQ27 194 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 A0A1W2PQ64 194 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 A0A1W2PQD8 194 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 E9PMD0 336 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 LAD1O00515 517 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 TBX3O15119 743 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 POLR2DO15514 142 aaKnown RBP5.84□□□□□ -1.47
SPG11-220ENST00000559933 ADCY3O60266 1144 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 LGR5O75473 907 aa5.84□□□□□ -1.47
SPG11-220ENST00000559933 HOXC6P09630 235 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms