RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 NEK11Q8NG66 645 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 IFT74Q96LB3 600 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 SPATA33Q96N06 139 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 KATNBL1Q9H079 304 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 FAM207AQ9NSI2 230 aaPredicted RBP13.9□□□□□ -0.18
USP3-213ENST00000559711 PLAGL2Q9UPG8 496 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 EXOC7Q9UPT5 735 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 FRMD4BQ9Y2L6 1034 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 ADGRG1Q9Y653 693 aa13.9□□□□□ -0.18
USP3-213ENST00000559711 EMSYQ7Z589 1322 aa13.9□□□□□ -0.19
USP3-213ENST00000559711 DENND3A2RUS2 1198 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 GTPBP10A4D1E9 387 aaKnown RBP13.89□□□□□ -0.19
USP3-213ENST00000559711 GOLGA6L9A6NEM1 432 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 H0YCG3 227 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 MAPK13O15264 365 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 NOL4O94818 638 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 SNAI1O95863 264 aaPredicted RBP13.89□□□□□ -0.19
USP3-213ENST00000559711 SLC26A2P50443 739 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 CYP2J2P51589 502 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 INHBEP58166 350 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 PPP2R5AQ15172 486 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 DPP9Q86TI2 863 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 SLC7A3Q8WY07 619 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 BBXQ8WY36 941 aaPredicted RBP13.89□□□□□ -0.19
USP3-213ENST00000559711 BAP1Q92560 729 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 COPS5Q92905 334 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 CHP1Q99653 195 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 POLR3FQ9H1D9 316 aaPredicted RBP13.89□□□□□ -0.19
USP3-213ENST00000559711 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.89□□□□□ -0.19
USP3-213ENST00000559711 ARHGAP28Q9P2N2 729 aa13.89□□□□□ -0.19
USP3-213ENST00000559711 EXOC3O60645 756 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 MAFO75444 373 aaPredicted RBP13.88□□□□□ -0.19
USP3-213ENST00000559711 SLC10A3P09131 477 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 CCDC175P0C221 793 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 ARHGAP1Q07960 439 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 LAMC2Q13753 1193 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 TMEM63BQ5T3F8 832 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 DPY19L2P1Q6NXN4 242 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 ATP8B4Q8TF62 1192 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 GLG1Q92896 1179 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 EMID1Q96A84 441 aaPredicted RBP13.88□□□□□ -0.19
USP3-213ENST00000559711 MAML3Q96JK9 1138 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 PLCB1Q9NQ66 1216 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
USP3-213ENST00000559711 CEP72Q9P209 647 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 ADGRA3Q8IWK6 1321 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 TERF1P54274 439 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 MORN1Q5T089 497 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 EXOC8Q8IYI6 725 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 MSL3Q8N5Y2 521 aaKnown RBP13.88□□□□□ -0.19
USP3-213ENST00000559711 XXYLT1Q8NBI6 393 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 TMEM143Q96AN5 459 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 CBWD1Q9BRT8 395 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 CRACR2AQ9BSW2 395 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 DESI2Q9BSY9 194 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 KIFC3Q9BVG8 833 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 LSM14BQ9BX40 385 aaKnown RBP13.88□□□□□ -0.19
USP3-213ENST00000559711 NUCKS1Q9H1E3 243 aaKnown RBP13.88□□□□□ -0.19
USP3-213ENST00000559711 SMARCAD1Q9H4L7 1026 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 CPA4Q9UI42 421 aa13.88□□□□□ -0.19
USP3-213ENST00000559711 R3HCC1Q9Y3T6 440 aaKnown RBP13.88□□□□□ -0.19
USP3-213ENST00000559711 EPN1Q9Y6I3 576 aaPredicted RBP13.88□□□□□ -0.19
USP3-213ENST00000559711 TISP43B9A030 160 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 GH1P01241 217 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 GLRA2P23416 452 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 CNGA1P29973 690 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 ADSSP30520 456 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 NAMPTP43490 491 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 PLCB4Q15147 1175 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 EXOC3L4Q17RC7 722 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 BRDTQ58F21 947 aaPredicted RBP13.87□□□□□ -0.19
USP3-213ENST00000559711 DCAF17Q5H9S7 520 aaPredicted RBP13.87□□□□□ -0.19
USP3-213ENST00000559711 TCERG1LQ5VWI1 586 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 PDXDC1Q6P996 788 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 C17orf99Q6UX52 265 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 TAS1R3Q7RTX0 852 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 IFNL1Q8IU54 200 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 CCDC170Q8IYT3 715 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 ASAP3Q8TDY4 903 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 SYN2Q92777 582 aaPredicted RBP13.87□□□□□ -0.19
USP3-213ENST00000559711 PRIMPOLQ96LW4 560 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 TINF2Q9BSI4 451 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 GANQ9H2C0 597 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 SLC5A4Q9NY91 659 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 HSPBP1Q9NZL4 362 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 TLL2Q9Y6L7 1015 aa13.87□□□□□ -0.19
USP3-213ENST00000559711 DOCK5Q9H7D0 1870 aa13.86□□□□□ -0.19
USP3-213ENST00000559711 IGKV6-21A0A0C4DH24 114 aa13.86□□□□□ -0.19
USP3-213ENST00000559711 ZBTB42B2RXF5 422 aa13.86□□□□□ -0.19
USP3-213ENST00000559711 ANKRD63C9JTQ0 380 aa13.86□□□□□ -0.19
USP3-213ENST00000559711 GAS2O43903 313 aaKnown RBP13.86□□□□□ -0.19
USP3-213ENST00000559711 NDUFA10O95299 355 aa13.86□□□□□ -0.19
USP3-213ENST00000559711 PON1P27169 355 aa13.86□□□□□ -0.19
USP3-213ENST00000559711 BFSP1Q12934 665 aa13.86□□□□□ -0.19
USP3-213ENST00000559711 TAF1CQ15572 869 aaPredicted RBP13.86□□□□□ -0.19
USP3-213ENST00000559711 TRIM65Q6PJ69 517 aa13.86□□□□□ -0.19
USP3-213ENST00000559711 GBP6Q6ZN66 633 aa13.86□□□□□ -0.19
USP3-213ENST00000559711 INTS8Q75QN2 995 aaKnown RBP13.86□□□□□ -0.19
USP3-213ENST00000559711 RRAGAQ7L523 313 aa13.86□□□□□ -0.19
USP3-213ENST00000559711 TRIM50Q86XT4 487 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms