RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 TSKSQ9UJT2 592 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 ARID2Q68CP9 1835 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 BTNL10A8MVZ5 291 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 F8VZ95 297 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 EXOC3O60645 756 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 CCNE2O96020 404 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 YWHABP31946 246 aaKnown RBP12.05□□□□□ -0.48
SPG11-217ENST00000559511 GYS2P54840 703 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 C10orf76Q5T2E6 689 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 ALKBH5Q6P6C2 394 aaKnown RBP12.05□□□□□ -0.48
SPG11-217ENST00000559511 NSMFQ6X4W1 530 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 CCNI2Q6ZMN8 369 aaPredicted RBP12.05□□□□□ -0.48
SPG11-217ENST00000559511 CATSPERGQ6ZRH7 1159 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 TRMT1LQ7Z2T5 733 aaKnown RBP12.05□□□□□ -0.48
SPG11-217ENST00000559511 SLC9A9Q8IVB4 645 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 RDH13Q8NBN7 331 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 GOLGA5Q8TBA6 731 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 GDAP1L1Q96MZ0 367 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 PDCD2LQ9BRP1 358 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 GPR88Q9GZN0 384 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 ADARB2Q9NS39 739 aaKnown RBP12.05□□□□□ -0.48
SPG11-217ENST00000559511 TBC1D22BQ9NU19 505 aa12.05□□□□□ -0.48
SPG11-217ENST00000559511 DMGDHQ9UI17 866 aaKnown RBP12.05□□□□□ -0.48
SPG11-217ENST00000559511 ZHX1Q9UKY1 873 aaPredicted RBP12.05□□□□□ -0.48
SPG11-217ENST00000559511 ZNF214Q9UL59 606 aaPredicted RBP12.05□□□□□ -0.48
SPG11-217ENST00000559511 A0A0G2JMZ2 1700 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 DDX3XO00571 662 aaKnown RBP eCLIP12.04□□□□□ -0.48
SPG11-217ENST00000559511 BACH1O14867 736 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 EVI5O60447 810 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 LYPLA2O95372 231 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 OAZ1P54368 228 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 MYL7Q01449 175 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 BFSP1Q12934 665 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 PPP2R5AQ15172 486 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 SNRNP48Q6IEG0 339 aaKnown RBP12.04□□□□□ -0.48
SPG11-217ENST00000559511 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.04□□□□□ -0.48
SPG11-217ENST00000559511 GOLPH3Q9H4A6 298 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 PCIF1Q9H4Z3 704 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 RBM12Q9NTZ6 932 aaKnown RBP12.04□□□□□ -0.48
SPG11-217ENST00000559511 LARSQ9P2J5 1176 aaKnown RBP12.04□□□□□ -0.48
SPG11-217ENST00000559511 DNAJC12Q9UKB3 198 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 SNCAIPQ9Y6H5 919 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 TESPA1A2RU30 521 aaPredicted RBP12.04□□□□□ -0.48
SPG11-217ENST00000559511 EIF3JO75822 258 aaKnown RBP12.04□□□□□ -0.48
SPG11-217ENST00000559511 PLS3P13797 630 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 FERP16591 822 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 YBX3P16989 372 aaKnown RBP eCLIP12.04□□□□□ -0.48
SPG11-217ENST00000559511 SOX5P35711 763 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 PAFAH1B1P43034 410 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 FAM193AP78312 1265 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 DLG4P78352 724 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 SLC7A5Q01650 507 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 BAATQ14032 418 aaPredicted RBP12.04□□□□□ -0.48
SPG11-217ENST00000559511 VGLL4Q14135 290 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 TMEM132BQ14DG7 1078 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 MAP9Q49MG5 647 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 ZSWIM2Q8NEG5 633 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 LNX1Q8TBB1 728 aaPredicted RBP12.04□□□□□ -0.48
SPG11-217ENST00000559511 SYT17Q9BSW7 474 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 INTS2Q9H0H0 1204 aaKnown RBP12.04□□□□□ -0.48
SPG11-217ENST00000559511 GPRC5CQ9NQ84 441 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
SPG11-217ENST00000559511 MYH9P35579 1960 aaKnown RBP12.03□□□□□ -0.48
SPG11-217ENST00000559511 ADM5C9JUS6 153 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 MAPTP10636 758 aaKnown RBP12.03□□□□□ -0.48
SPG11-217ENST00000559511 ANXA13P27216 316 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 STAT1P42224 750 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 TNNT3P45378 269 aaPredicted RBP12.03□□□□□ -0.48
SPG11-217ENST00000559511 DRAP1Q14919 205 aaPredicted RBP12.03□□□□□ -0.48
SPG11-217ENST00000559511 CFAP221Q4G0U5 840 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 SH3D19Q5HYK7 790 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 ARHGEF16Q5VV41 709 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 PLA2G4FQ68DD2 849 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 CCDC70Q6NSX1 233 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 LRRC57Q8N9N7 239 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 INPP4AQ96PE3 977 aaPredicted RBP12.03□□□□□ -0.48
SPG11-217ENST00000559511 CBWD1Q9BRT8 395 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 SELENOOQ9BVL4 669 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 STK33Q9BYT3 514 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 APEX2Q9UBZ4 518 aa12.03□□□□□ -0.48
SPG11-217ENST00000559511 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
SPG11-217ENST00000559511 ATP2A1O14983 1001 aa12.02□□□□□ -0.48
SPG11-217ENST00000559511 NPEPPSP55786 919 aa12.02□□□□□ -0.48
SPG11-217ENST00000559511 GPS2Q13227 327 aa12.02□□□□□ -0.48
SPG11-217ENST00000559511 MYBPC2Q14324 1141 aa12.02□□□□□ -0.48
SPG11-217ENST00000559511 C4orf19Q8IY42 314 aa12.02□□□□□ -0.48
SPG11-217ENST00000559511 SLC30A5Q8TAD4 765 aa12.02□□□□□ -0.48
SPG11-217ENST00000559511 LMO3Q8TAP4 145 aa12.02□□□□□ -0.48
SPG11-217ENST00000559511 AENQ8WTP8 325 aaKnown RBP12.02□□□□□ -0.48
SPG11-217ENST00000559511 DCPSQ96C86 337 aaKnown RBP12.02□□□□□ -0.48
SPG11-217ENST00000559511 TMEM206Q9H813 350 aa12.02□□□□□ -0.48
SPG11-217ENST00000559511 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.02□□□□□ -0.48
SPG11-217ENST00000559511 HPCAL4Q9UM19 191 aa12.02□□□□□ -0.48
SPG11-217ENST00000559511 ATP8B3O60423 1300 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 SRCAPQ6ZRS2 3230 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 SPDYE16A6NNV3 312 aaPredicted RBP12.02□□□□□ -0.49
SPG11-217ENST00000559511 WDR64B1ANS9 1081 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 SLC16A4O15374 487 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 LRRN2O75325 713 aa12.02□□□□□ -0.49
SPG11-217ENST00000559511 CYP2C19P33261 490 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms