RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 H3BNC9 293 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 HOXA2O43364 376 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 MED24O75448 989 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 DGAT1O75907 488 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 ERLIN2O94905 339 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 LYPLA2O95372 231 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 RB1P06400 928 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 CCT6AP40227 531 aaKnown RBP9.12□□□□□ -0.95
SNX1-207ENST00000559401 RARRES1P49788 294 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 PTGDRQ13258 359 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 TFDP1Q14186 410 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 TIGD5Q53EQ6 642 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 LARP1BQ659C4 914 aaKnown RBP9.12□□□□□ -0.95
SNX1-207ENST00000559401 MAEAQ7L5Y9 396 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 CATSPER3Q86XQ3 398 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 RNF149Q8NC42 400 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 SNX29Q8TEQ0 813 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 MRPL38Q96DV4 380 aaKnown RBP9.12□□□□□ -0.95
SNX1-207ENST00000559401 POLR3FQ9H1D9 316 aaPredicted RBP9.12□□□□□ -0.95
SNX1-207ENST00000559401 TUFT1Q9NNX1 390 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 PLXNA4Q9HCM2 1894 aa9.12□□□□□ -0.95
SNX1-207ENST00000559401 ARHGEF35A5YM69 484 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 GRM6O15303 877 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 ASAP2O43150 1006 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 SPATA31C1P0DKV0 1188 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 TOB1P50616 345 aaPredicted RBP9.11□□□□□ -0.95
SNX1-207ENST00000559401 MRPS5P82675 430 aaKnown RBP9.11□□□□□ -0.95
SNX1-207ENST00000559401 TFF2Q03403 129 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 MXD4Q14582 209 aaPredicted RBP9.11□□□□□ -0.95
SNX1-207ENST00000559401 ZRSR1Q15695 479 aaKnown RBP9.11□□□□□ -0.95
SNX1-207ENST00000559401 AAK1Q2M2I8 961 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 LONRF3Q496Y0 759 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 RILPL1Q5EBL4 403 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 TJAP1Q5JTD0 557 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 SRGAP1Q7Z6B7 1085 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 FERMT3Q86UX7 667 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 ECHDC2Q86YB7 292 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 THNSL1Q8IYQ7 743 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 HELQQ8TDG4 1101 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 ATXN2LQ8WWM7 1075 aaKnown RBP9.11□□□□□ -0.95
SNX1-207ENST00000559401 CLP1Q92989 425 aaKnown RBP9.11□□□□□ -0.95
SNX1-207ENST00000559401 NACC1Q96RE7 527 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 POLR3CQ9BUI4 534 aaPredicted RBP9.11□□□□□ -0.95
SNX1-207ENST00000559401 TMEM117Q9H0C3 514 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 ELAC1Q9H777 363 aaKnown RBP9.11□□□□□ -0.95
SNX1-207ENST00000559401 ALG13Q9NP73 1137 aaKnown RBP9.11□□□□□ -0.95
SNX1-207ENST00000559401 XPNPEP1Q9NQW7 623 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 CHST12Q9NRB3 414 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 AAASQ9NRG9 546 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 FOXD4L1Q9NU39 408 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 HCSTQ9UBK5 93 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 PCDHB12Q9Y5F1 795 aa9.11□□□□□ -0.95
SNX1-207ENST00000559401 A0A0U1RQF3 1178 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 LRRIQ4A6NIV6 560 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 C5orf67F2Z3F1 127 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 INO80B-WBP1J3KQ70 363 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 LAD1O00515 517 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 SKIP12755 728 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 XRCC6P12956 609 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNX1-207ENST00000559401 LAG3P18627 525 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 RPA1P27694 616 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 FXR2P51116 673 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNX1-207ENST00000559401 RAB27AP51159 221 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 FAM189BP81408 668 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 NCBP1Q09161 790 aaKnown RBP9.1□□□□□ -0.95
SNX1-207ENST00000559401 CAPSQ13938 189 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 TMEM132AQ24JP5 1023 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 TCEAL5Q5H9L2 206 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 KRT79Q5XKE5 535 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 DTHD1Q6ZMT9 781 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 CRIPAKQ8N1N5 446 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 LRRC43Q8N309 656 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 KLHL23Q8NBE8 558 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 MCPH1Q8NEM0 835 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 ASAP3Q8TDY4 903 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 SYMPKQ92797 1274 aaKnown RBP9.1□□□□□ -0.95
SNX1-207ENST00000559401 LPPQ93052 612 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 P2RX5Q93086 422 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 HLA-CQ95604 372 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 ASB2Q96Q27 587 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 PLVAPQ9BX97 442 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 COL25A1Q9BXS0 654 aaPredicted RBP9.1□□□□□ -0.95
SNX1-207ENST00000559401 LMAN2LQ9H0V9 348 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 NSUN3Q9H649 340 aaKnown RBP9.1□□□□□ -0.95
SNX1-207ENST00000559401 MINDY3Q9H8M7 445 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 IFT122Q9HBG6 1241 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 GPRC5CQ9NQ84 441 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.1□□□□□ -0.95
SNX1-207ENST00000559401 AGPAT5Q9NUQ2 364 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 DDX19AQ9NUU7 478 aaKnown RBP9.1□□□□□ -0.95
SNX1-207ENST00000559401 TYW1Q9NV66 732 aaKnown RBP9.1□□□□□ -0.95
SNX1-207ENST00000559401 DBR1Q9UK59 544 aaKnown RBP9.1□□□□□ -0.95
SNX1-207ENST00000559401 COG5Q9UP83 839 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 KIAA1024Q9UPX6 916 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 INPP5FQ9Y2H2 1132 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 STK24Q9Y6E0 443 aa9.1□□□□□ -0.95
SNX1-207ENST00000559401 CDH23Q9H251 3354 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 VWA3AA6NCI4 1184 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 PP2D1A8MPX8 630 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 ITGB1P05556 798 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms