RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 LSAMPQ13449 338 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 SF1Q15637 639 aaKnown RBP6.32□□□□□ -1.4
CASC4-207ENST00000559037 CCDC93Q567U6 631 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 TCERG1LQ5VWI1 586 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 ERICH6BQ5W0A0 696 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 NSMFQ6X4W1 530 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 IGDCC3Q8IVU1 814 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 RTKN2Q8IZC4 609 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 DNAJC5GQ8N7S2 189 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 DCAF4Q8WV16 495 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 ALG3Q92685 438 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 TRMT2BQ96GJ1 504 aaKnown RBP6.32□□□□□ -1.4
CASC4-207ENST00000559037 ISCA1Q9BUE6 129 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 UTP14AQ9BVJ6 771 aaKnown RBP6.32□□□□□ -1.4
CASC4-207ENST00000559037 HYPKQ9NX55 129 aa6.32□□□□□ -1.4
CASC4-207ENST00000559037 SCN9AQ15858 1988 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 RNF123Q5XPI4 1314 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 ELL2O00472 640 aaPredicted RBP6.31□□□□□ -1.4
CASC4-207ENST00000559037 MAFKO60675 156 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 FSTL1Q12841 308 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 RASA3Q14644 834 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 PRSS53Q2L4Q9 553 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 CEP68Q76N32 757 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 SCUBE1Q8IWY4 988 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 TSPYL6Q8N831 410 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 RCBTB1Q8NDN9 531 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 RBM17Q96I25 401 aaKnown RBP6.31□□□□□ -1.4
CASC4-207ENST00000559037 IPO9Q96P70 1041 aaKnown RBP6.31□□□□□ -1.4
CASC4-207ENST00000559037 DEPDC7Q96QD5 511 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 PSMD1Q99460 953 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 NGRNQ9NPE2 291 aaKnown RBP6.31□□□□□ -1.4
CASC4-207ENST00000559037 FBLN5Q9UBX5 448 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 TMEFF2Q9UIK5 374 aaPredicted RBP6.31□□□□□ -1.4
CASC4-207ENST00000559037 FAN1Q9Y2M0 1017 aa6.31□□□□□ -1.4
CASC4-207ENST00000559037 LRRC37AA6NMS7 1700 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 SH3TC1Q8TE82 1336 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 PSME4Q14997 1843 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 FZD9O00144 591 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 PRODHO43272 600 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 BBOX1O75936 387 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 DDNO94850 711 aaPredicted RBP6.3□□□□□ -1.4
CASC4-207ENST00000559037 ZSCAN22P10073 491 aaPredicted RBP6.3□□□□□ -1.4
CASC4-207ENST00000559037 PI3P19957 117 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 BCL6P41182 706 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 SSRP1Q08945 709 aaKnown RBP6.3□□□□□ -1.4
CASC4-207ENST00000559037 SF3B3Q15393 1217 aaKnown RBP6.3□□□□□ -1.4
CASC4-207ENST00000559037 DENND5AQ6IQ26 1287 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 CYP4F22Q6NT55 531 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 FAM129CQ86XR2 697 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 TEX2Q8IWB9 1127 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 SP8Q8IXZ3 490 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.3□□□□□ -1.4
CASC4-207ENST00000559037 RPGRQ92834 1020 aaKnown RBP6.3□□□□□ -1.4
CASC4-207ENST00000559037 OSBP2Q969R2 916 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 EPB41L1Q9H4G0 881 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 TRMT112Q9UI30 125 aaKnown RBP6.3□□□□□ -1.4
CASC4-207ENST00000559037 ATP6V0A2Q9Y487 856 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 PCDHA2Q9Y5H9 948 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 COL4A5P29400 1685 aa6.3□□□□□ -1.4
CASC4-207ENST00000559037 SPEF2Q9C093 1822 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 IL16Q14005 1332 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 ADAMTSL1Q8N6G6 1762 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 DGKIO75912 1065 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 ASGR2P07307 311 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 NAT1P18440 290 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 IARSP41252 1262 aaKnown RBP6.29□□□□□ -1.4
CASC4-207ENST00000559037 SUMO1P63165 101 aaKnown RBP6.29□□□□□ -1.4
CASC4-207ENST00000559037 SSPNQ14714 243 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 KIZQ2M2Z5 673 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 EMC4Q5J8M3 183 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 CNKSR3Q6P9H4 555 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 USP53Q70EK8 1073 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 MAMDC2Q7Z304 686 aaPredicted RBP6.29□□□□□ -1.4
CASC4-207ENST00000559037 B3GNT8Q7Z7M8 397 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 MIB1Q86YT6 1006 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 WDR63Q8IWG1 891 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 C16orf71Q8IYS4 520 aaPredicted RBP6.29□□□□□ -1.4
CASC4-207ENST00000559037 ZBTB38Q8NAP3 1195 aaPredicted RBP6.29□□□□□ -1.4
CASC4-207ENST00000559037 SMC1BQ8NDV3 1235 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 PHOSPHO1Q8TCT1 267 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 DACT3Q96B18 629 aaPredicted RBP6.29□□□□□ -1.4
CASC4-207ENST00000559037 CHMP4AQ9BY43 222 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 VPS33BQ9H267 617 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 ZNF277Q9NRM2 450 aaPredicted RBP6.29□□□□□ -1.4
CASC4-207ENST00000559037 NUB1Q9Y5A7 615 aa6.29□□□□□ -1.4
CASC4-207ENST00000559037 LTBP1Q14766 1721 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 ARNTLO00327 626 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 ADCY3O60266 1144 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 FPR2P25090 351 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 PMLP29590 882 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 AFF3P51826 1226 aaKnown RBP6.28□□□□□ -1.4
CASC4-207ENST00000559037 GPR85P60893 370 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 CACNB2Q08289 660 aaPredicted RBP6.28□□□□□ -1.4
CASC4-207ENST00000559037 CCDC30Q5VVM6 783 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 SPOCD1Q6ZMY3 1216 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 ETV3LQ6ZN32 361 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 SPATC1Q76KD6 591 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 ZC3H18Q86VM9 953 aaKnown RBP6.28□□□□□ -1.4
CASC4-207ENST00000559037 TMEFF1Q8IYR6 380 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms