RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 MARSP56192 900 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 INF2Q27J81 1249 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 Q4G0T1 1027 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 EARS2Q5JPH6 523 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZNF746Q6NUN9 644 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 KRT25Q7Z3Z0 450 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 SLC9A9Q8IVB4 645 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 CCDC83Q8IWF9 413 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 KDF1Q8NAX2 398 aaPredicted RBP6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 TNFRSF25Q93038 417 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 ITPKCQ96DU7 683 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 FAM161BQ96MY7 647 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 MBOAT7Q96N66 472 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 GUCD1Q96NT3 240 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 FTOQ9C0B1 505 aaKnown RBP eCLIP6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 MTIF3Q9H2K0 278 aaKnown RBP6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 TBC1D22BQ9NU19 505 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 EGFL7Q9UHF1 273 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 TUBE1Q9UJT0 475 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 LIMCH1Q9UPQ0 1083 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 USP3Q9Y6I4 520 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 SLC4A7Q9Y6M7 1214 aa6.81□□□□□ -1.32
CTDSPL2-204ENST00000558966 EVPLQ92817 2033 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 TMEM265A0A087WTH1 108 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 A6NJY4 79 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 RSPH10B2B2RC85 870 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 SLC37A4O43826 429 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 CAND2O75155 1236 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 PSMD10O75832 226 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 ADH1AP07327 375 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 RSPH10BP0C881 870 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 ACTN1P12814 892 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 SMTNP53814 917 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 KRT76Q01546 638 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 SWSAP1Q6NVH7 229 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 MIS18BP1Q6P0N0 1132 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 CNKSR3Q6P9H4 555 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 MOXD1Q6UVY6 613 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 PIK3AP1Q6ZUJ8 805 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 RPAINQ86UA6 219 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 ETNPPLQ8TBG4 499 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 TRAPPC12Q8WVT3 735 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 WASF1Q92558 559 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 SLC5A5Q92911 643 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 TIFAQ96CG3 184 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 RIT2Q99578 217 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 SEMA6BQ9H3T3 888 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZNF302Q9NR11 478 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 PLA2G2EQ9NZK7 142 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 SCHIP1Q9P0W5 487 aaPredicted RBP6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 YBX2Q9Y2T7 364 aaKnown RBP6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 IGSF9BQ9UPX0 1349 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 UNC80Q8N2C7 3258 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 LOXHD1Q8IVV2 1947 aa6.8□□□□□ -1.32
CTDSPL2-204ENST00000558966 CCDC194A0A1B0GVG4 234 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 RRN3P2A6NIE6 340 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 WDR64B1ANS9 1081 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZBTB42B2RXF5 422 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 TNFRSF10AO00220 468 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 GAS7O60861 476 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 BAIAP3O94812 1187 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 MMP1P03956 469 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 ATP2A2P16615 1042 aaKnown RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 SLC26A2P50443 739 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 RABGGTBP53611 331 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 WDR5P61964 334 aaKnown RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 IGBP1P78318 339 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 MGAT3Q09327 533 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 UGCGQ16739 394 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 LETM2Q2VYF4 491 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 FAM26DQ5JW98 314 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 LRCH2Q5VUJ6 765 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 FAM160B1Q5W0V3 765 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 KRT40Q6A162 431 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 TAF2Q6P1X5 1199 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 B3GNT9Q6UX72 402 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 DNAJC14Q6Y2X3 702 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 NEK8Q86SG6 692 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 SMAP1Q8IYB5 467 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 SNIP1Q8TAD8 396 aaKnown RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 ATP8B4Q8TF62 1192 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 DNAJB3Q8WWF6 145 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 TBC1D32Q96NH3 1257 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 UNC45AQ9H3U1 944 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZFAND3Q9H8U3 227 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 PCDHA10Q9Y5I2 948 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 REV3LO60673 3130 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 BTBD18B2RXH4 712 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 CHMP2AO43633 222 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZNF862O60290 1169 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 HBP1O60381 514 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 ZIC2O95409 532 aaPredicted RBP6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 CHRNA1P02708 482 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 PSAPP07602 524 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 MYOGP15173 224 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 KRT2P35908 639 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 DEFB103AP81534 67 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 FOXK2Q01167 660 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 RABEP1Q15276 862 aa6.79□□□□□ -1.32
CTDSPL2-204ENST00000558966 TLR1Q15399 786 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms