RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 KLHL5Q96PQ7 755 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 SLC2A4RGQ9NR83 387 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 ZSCAN32Q9NX65 697 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 DNAJB4Q9UDY4 337 aa13.6□□□□□ -0.23
SMAD3-206ENST00000558739 PNMA6FA0A0J9YX94 578 aa13.59□□□□□ -0.23
SMAD3-206ENST00000558739 MEIS3P2A8K0S8 358 aa13.59□□□□□ -0.23
SMAD3-206ENST00000558739 FGFR4P22455 802 aa13.59□□□□□ -0.23
SMAD3-206ENST00000558739 STAT5BP51692 787 aa13.59□□□□□ -0.23
SMAD3-206ENST00000558739 CRYBB1P53674 252 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-206ENST00000558739 GPC5P78333 572 aa13.59□□□□□ -0.23
SMAD3-206ENST00000558739 GRM4Q14833 912 aa13.59□□□□□ -0.23
SMAD3-206ENST00000558739 UBXN2BQ14CS0 331 aa13.59□□□□□ -0.23
SMAD3-206ENST00000558739 NONOQ15233 471 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMAD3-206ENST00000558739 SEC23AQ15436 765 aa13.59□□□□□ -0.23
SMAD3-206ENST00000558739 N4BP2L1Q5TBK1 243 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-206ENST00000558739 GET4Q7L5D6 327 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-206ENST00000558739 ZNF707Q96C28 371 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-206ENST00000558739 SLC9A2Q9UBY0 812 aa13.59□□□□□ -0.23
SMAD3-206ENST00000558739 GMEB2Q9UKD1 530 aa13.59□□□□□ -0.23
SMAD3-206ENST00000558739 UBIAD1Q9Y5Z9 338 aa13.59□□□□□ -0.23
SMAD3-206ENST00000558739 CCDC195A0A1B0GUA6 201 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 KANSL1LA0AUZ9 987 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 C1QTNF9BB2RNN3 333 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 ANHXE9PGG2 379 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 C22orf31O95567 290 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 C1QTNF9P0C862 333 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 KLRC2P26717 231 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 POLGP54098 1239 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-206ENST00000558739 ITGB3BPQ13352 177 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-206ENST00000558739 UBE2SQ16763 222 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 CCDC178Q5BJE1 867 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 CYB5R4Q7L1T6 521 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 FGF14Q92915 247 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 LPPQ93052 612 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 EVI5LQ96CN4 794 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 UBAC1Q9BSL1 405 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 DDX23Q9BUQ8 820 aaKnown RBP13.58□□□□□ -0.24
SMAD3-206ENST00000558739 BCO2Q9BYV7 579 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 UNC79Q9P2D8 2635 aa13.58□□□□□ -0.24
SMAD3-206ENST00000558739 KALRNO60229 2985 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 C2CD2LO14523 706 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 ZNF213O14771 459 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 INPPL1O15357 1258 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 LILRB3O75022 631 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 CCNE2O96020 404 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 SPATA31D3P0C874 917 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 MS4A1P11836 297 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 LAMP2P13473 410 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 SLC11A1P49279 550 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 CLCN3P51790 818 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 SPATA31D4Q6ZUB0 917 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 PLPPR4Q7Z2D5 763 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 PPFIBP1Q86W92 1011 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 CCDC60Q8IWA6 550 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-206ENST00000558739 CMASQ8NFW8 434 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-206ENST00000558739 CDHR1Q96JP9 859 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 GBP3Q9H0R5 595 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 NRDE2Q9H7Z3 1164 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 TBC1D13Q9NVG8 400 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 ZMIZ1Q9ULJ6 1067 aa13.57□□□□□ -0.24
SMAD3-206ENST00000558739 FAM170BA6NMN3 283 aa13.56□□□□□ -0.24
SMAD3-206ENST00000558739 CCER2I3L3R5 266 aa13.56□□□□□ -0.24
SMAD3-206ENST00000558739 PIK3CDO00329 1044 aa13.56□□□□□ -0.24
SMAD3-206ENST00000558739 CSDE1O75534 798 aaKnown RBP13.56□□□□□ -0.24
SMAD3-206ENST00000558739 PROS1P07225 676 aa13.56□□□□□ -0.24
SMAD3-206ENST00000558739 GALTP07902 379 aa13.56□□□□□ -0.24
SMAD3-206ENST00000558739 SHC2P98077 582 aa13.56□□□□□ -0.24
SMAD3-206ENST00000558739 GIT2Q14161 759 aa13.56□□□□□ -0.24
SMAD3-206ENST00000558739 BMS1Q14692 1282 aaKnown RBP13.56□□□□□ -0.24
SMAD3-206ENST00000558739 PARM1Q6UWI2 310 aa13.56□□□□□ -0.24
SMAD3-206ENST00000558739 TRMT1LQ7Z2T5 733 aaKnown RBP13.56□□□□□ -0.24
SMAD3-206ENST00000558739 METTL13Q8N6R0 699 aa13.56□□□□□ -0.24
SMAD3-206ENST00000558739 SMG7Q92540 1137 aaKnown RBP13.56□□□□□ -0.24
SMAD3-206ENST00000558739 MRPL9Q9BYD2 267 aaKnown RBP13.56□□□□□ -0.24
SMAD3-206ENST00000558739 ADAMTS10Q9H324 1103 aa13.56□□□□□ -0.24
SMAD3-206ENST00000558739 PRMT8Q9NR22 394 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-206ENST00000558739 KCNH7Q9NS40 1196 aa13.56□□□□□ -0.24
SMAD3-206ENST00000558739 MYH9P35579 1960 aaKnown RBP13.56□□□□□ -0.24
SMAD3-206ENST00000558739 A0A0U1RQF3 1178 aa13.55□□□□□ -0.24
SMAD3-206ENST00000558739 DDX39AO00148 427 aaKnown RBP13.55□□□□□ -0.24
SMAD3-206ENST00000558739 TBC1D4O60343 1298 aa13.55□□□□□ -0.24
SMAD3-206ENST00000558739 ZIC2O95409 532 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-206ENST00000558739 TDGF1P13385 188 aa13.55□□□□□ -0.24
SMAD3-206ENST00000558739 ATP4AP20648 1035 aa13.55□□□□□ -0.24
SMAD3-206ENST00000558739 TARSP26639 723 aaKnown RBP13.55□□□□□ -0.24
SMAD3-206ENST00000558739 MLF2Q15773 248 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-206ENST00000558739 ODR4Q5SWX8 454 aa13.55□□□□□ -0.24
SMAD3-206ENST00000558739 PRR23CQ6ZRP0 262 aa13.55□□□□□ -0.24
SMAD3-206ENST00000558739 STAMQ92783 540 aa13.55□□□□□ -0.24
SMAD3-206ENST00000558739 EMILIN2Q9BXX0 1053 aa13.55□□□□□ -0.24
SMAD3-206ENST00000558739 LTB4R2Q9NPC1 389 aa13.55□□□□□ -0.24
SMAD3-206ENST00000558739 JADE2Q9NQC1 790 aa13.55□□□□□ -0.24
SMAD3-206ENST00000558739 SEMA4GQ9NTN9 838 aa13.55□□□□□ -0.24
SMAD3-206ENST00000558739 INPP5FQ9Y2H2 1132 aa13.55□□□□□ -0.24
SMAD3-206ENST00000558739 TENM4Q6N022 2769 aa13.54□□□□□ -0.24
SMAD3-206ENST00000558739 MTCL1Q9Y4B5 1905 aaKnown RBP13.54□□□□□ -0.24
SMAD3-206ENST00000558739 SPAG17Q6Q759 2223 aa13.54□□□□□ -0.24
SMAD3-206ENST00000558739 TEX28O15482 410 aa13.54□□□□□ -0.24
SMAD3-206ENST00000558739 ZSCAN20P17040 1043 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-206ENST00000558739 AFF1P51825 1210 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms