RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 DENND2AQ9ULE3 1009 aa11.76□□□□□ -0.53
MARK3-213ENST00000558611 NPFFR2Q9Y5X5 522 aa11.76□□□□□ -0.53
MARK3-213ENST00000558611 ST14Q9Y5Y6 855 aa11.76□□□□□ -0.53
MARK3-213ENST00000558611 MAST3O60307 1309 aa11.76□□□□□ -0.53
MARK3-213ENST00000558611 PDS5AQ29RF7 1337 aaKnown RBP11.76□□□□□ -0.53
MARK3-213ENST00000558611 GABRDO14764 452 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 SART1O43290 800 aaKnown RBP11.75□□□□□ -0.53
MARK3-213ENST00000558611 MYO1BO43795 1136 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 GAS2O43903 313 aaKnown RBP11.75□□□□□ -0.53
MARK3-213ENST00000558611 LRRN2O75325 713 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 EIF3JO75822 258 aaKnown RBP11.75□□□□□ -0.53
MARK3-213ENST00000558611 F2P00734 622 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 RBM5P52756 815 aaKnown RBP eCLIP11.75□□□□□ -0.53
MARK3-213ENST00000558611 SART3Q15020 963 aaKnown RBP11.75□□□□□ -0.53
MARK3-213ENST00000558611 DPY19L1Q2PZI1 675 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 MAP9Q49MG5 647 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 CDPF1Q6NVV7 123 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 KCNT2Q6UVM3 1135 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 MTDHQ86UE4 582 aaKnown RBP11.75□□□□□ -0.53
MARK3-213ENST00000558611 IFNL3Q8IZI9 196 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 PRMT6Q96LA8 375 aaPredicted RBP11.75□□□□□ -0.53
MARK3-213ENST00000558611 MENTQ9BUN1 341 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 CRTAC1Q9NQ79 661 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 KCNH3Q9ULD8 1083 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 SCAF8Q9UPN6 1271 aaKnown RBP11.75□□□□□ -0.53
MARK3-213ENST00000558611 EXOC6BQ9Y2D4 811 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 FPGT-TNNI3KV9GXZ4 949 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 AOX1Q06278 1338 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 SALL1Q9NSC2 1324 aa11.75□□□□□ -0.53
MARK3-213ENST00000558611 H0Y8X5 98 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 ARVCFO00192 962 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 CBX4O00257 560 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 HMMRO75330 724 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 GSNP06396 782 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 ID4P47928 161 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 GPR85P60893 370 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 DEFB115Q30KQ5 88 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 NXNQ6DKJ4 435 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 ABHD17CQ6PCB6 329 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 TMC3Q7Z5M5 1100 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 SAPCD2Q86UD0 394 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 ERC1Q8IUD2 1116 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 SIRT2Q8IXJ6 389 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 PPIL6Q8IXY8 311 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 SMC5Q8IY18 1101 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 TCEAL8Q8IYN2 117 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.74□□□□□ -0.53
MARK3-213ENST00000558611 TEKT1Q969V4 418 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 GBA2Q9HCG7 927 aaPredicted RBP11.74□□□□□ -0.53
MARK3-213ENST00000558611 GPR27Q9NS67 375 aa11.74□□□□□ -0.53
MARK3-213ENST00000558611 CLRN2A0PK11 232 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 SSC5DA1L4H1 1573 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 K7ESF4 209 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 PIK3R2O00459 728 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 FBXO21O94952 628 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 PRAMEF1O95521 474 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 EOMESO95936 686 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 NFICP08651 508 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 MYH1P12882 1939 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 PRDX5P30044 214 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 DSG1Q02413 1049 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 HSP90AB4PQ58FF6 505 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 CWF19L1Q69YN2 538 aaKnown RBP11.73□□□□□ -0.53
MARK3-213ENST00000558611 SEZ6L2Q6UXD5 910 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 LINC00114Q6XXX2 140 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 Q6ZS46 218 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 ZGPATQ8N5A5 531 aaKnown RBP11.73□□□□□ -0.53
MARK3-213ENST00000558611 C2orf69Q8N8R5 385 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 NPLOC4Q8TAT6 608 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 COG1Q8WTW3 980 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 HHIPL1Q96JK4 782 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 PHF20Q9BVI0 1012 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 MRIQ9BWK5 157 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 ASCC2Q9H1I8 757 aaPredicted RBP11.73□□□□□ -0.53
MARK3-213ENST00000558611 TPX2Q9ULW0 747 aaKnown RBP11.73□□□□□ -0.53
MARK3-213ENST00000558611 PCDHA8Q9Y5H6 950 aa11.73□□□□□ -0.53
MARK3-213ENST00000558611 ATAD5Q96QE3 1844 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 WDR33Q9C0J8 1336 aaKnown RBP11.72□□□□□ -0.53
MARK3-213ENST00000558611 RFPL1O75677 317 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 GLRX3O76003 335 aaKnown RBP11.72□□□□□ -0.53
MARK3-213ENST00000558611 KRT18P05783 430 aaKnown RBP11.72□□□□□ -0.53
MARK3-213ENST00000558611 THBDP07204 575 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 FAPQ12884 760 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 BIRC2Q13490 618 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 FAM102BQ5T8I3 360 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 E4F1Q66K89 784 aaPredicted RBP11.72□□□□□ -0.53
MARK3-213ENST00000558611 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 C14orf80Q86SX3 495 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 TTC8Q8TAM2 541 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 FRS2Q8WU20 508 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 DBNDD2Q9BQY9 259 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 TDRD3Q9H7E2 651 aaKnown RBP11.72□□□□□ -0.53
MARK3-213ENST00000558611 AKTIPQ9H8T0 292 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 VEZTQ9HBM0 779 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 ENAMQ9NRM1 1142 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 HMG20BQ9P0W2 317 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 ZNF70Q9UC06 446 aaPredicted RBP11.72□□□□□ -0.53
MARK3-213ENST00000558611 PPP2R3BQ9Y5P8 575 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 BACE2Q9Y5Z0 518 aa11.72□□□□□ -0.53
MARK3-213ENST00000558611 ZNF891A8MT65 544 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms