RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 APEX2Q9UBZ4 518 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 ANAPC7Q9UJX3 599 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 ZNF148Q9UQR1 794 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 GINS2Q9Y248 185 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 ECEL1O95672 775 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 CLTAP09496 248 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 FAM160B2Q86V87 743 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 CNOT8Q9UFF9 292 aaKnown RBP16.67■□□□□ 0.26
AP4E1-202ENST00000558439 SALL4Q9UJQ4 1053 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 P4HBP07237 508 aaKnown RBP16.67■□□□□ 0.26
AP4E1-202ENST00000558439 ASNSP08243 561 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 ARP10275 920 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 PIK3CAP42336 1068 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 QARSP47897 775 aaKnown RBP16.67■□□□□ 0.26
AP4E1-202ENST00000558439 EPHA7Q15375 998 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 CLUL1Q15846 466 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 NLRP14Q86W24 1093 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 AGPAT1Q99943 283 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 HOMER3Q9NSC5 361 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 PCDHB4Q9Y5E5 795 aa16.67■□□□□ 0.26
AP4E1-202ENST00000558439 DENND3A2RUS2 1198 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 FOXN3O00409 490 aaPredicted RBP16.66■□□□□ 0.26
AP4E1-202ENST00000558439 RASGRF2O14827 1237 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 KCNJ1P48048 391 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 EPC2Q52LR7 807 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 ELMO3Q96BJ8 720 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 STK38LQ9Y2H1 464 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 BAZ2AQ9UIF9 1905 aaKnown RBP16.66■□□□□ 0.26
AP4E1-202ENST00000558439 ATF2P15336 505 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 NPEPPSP55786 919 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 EEPD1Q7L9B9 569 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 C1orf54Q8WWF1 131 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 THAP2Q9H0W7 228 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 ABCC6O95255 1503 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 LSP1P33241 339 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 BFSP1Q12934 665 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 ZNF394Q53GI3 561 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 FBXW10Q5XX13 1052 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 FAM213AQ9BRX8 229 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 NUP85Q9BW27 656 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 TMEM39BQ9GZU3 492 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 TUFT1Q9NNX1 390 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.66■□□□□ 0.26
AP4E1-202ENST00000558439 SEL1LQ9UBV2 794 aa16.66■□□□□ 0.26
AP4E1-202ENST00000558439 POC1B-GALNT4F8VUJ3 575 aa16.65■□□□□ 0.26
AP4E1-202ENST00000558439 DKC1O60832 514 aaKnown RBP eCLIP16.65■□□□□ 0.26
AP4E1-202ENST00000558439 TRADDQ15628 312 aa16.65■□□□□ 0.26
AP4E1-202ENST00000558439 MEI1Q5TIA1 1274 aa16.65■□□□□ 0.26
AP4E1-202ENST00000558439 CCT8L2Q96SF2 557 aa16.65■□□□□ 0.26
AP4E1-202ENST00000558439 ZBTB16Q05516 673 aa16.65■□□□□ 0.26
AP4E1-202ENST00000558439 PLA2G4FQ68DD2 849 aa16.65■□□□□ 0.26
AP4E1-202ENST00000558439 AGPAT3Q9NRZ7 376 aa16.65■□□□□ 0.26
AP4E1-202ENST00000558439 PARP4Q9UKK3 1724 aaKnown RBP16.65■□□□□ 0.26
AP4E1-202ENST00000558439 ATP5DP30049 168 aa16.65■□□□□ 0.26
AP4E1-202ENST00000558439 MDH1P40925 334 aaKnown RBP16.65■□□□□ 0.26
AP4E1-202ENST00000558439 RWDD2BP57060 319 aa16.65■□□□□ 0.26
AP4E1-202ENST00000558439 FAM133BQ5BKY9 247 aaKnown RBP16.65■□□□□ 0.26
AP4E1-202ENST00000558439 ZNF564Q8TBZ8 553 aaPredicted RBP16.65■□□□□ 0.26
AP4E1-202ENST00000558439 ELAC2Q9BQ52 826 aaKnown RBP16.65■□□□□ 0.26
AP4E1-202ENST00000558439 KIFC3Q9BVG8 833 aa16.65■□□□□ 0.26
AP4E1-202ENST00000558439 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.65■□□□□ 0.26
AP4E1-202ENST00000558439 ALG6Q9Y672 507 aa16.65■□□□□ 0.26
AP4E1-202ENST00000558439 GAKO14976 1311 aa16.64■□□□□ 0.26
AP4E1-202ENST00000558439 GMNCA6NCL1 334 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 CD58P19256 250 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 FGFR4P22455 802 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 SREBF1P36956 1147 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 HSD17B3P37058 310 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 PPP2R2AP63151 447 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 CCDC137Q6PK04 289 aaKnown RBP16.64■□□□□ 0.25
AP4E1-202ENST00000558439 RNF207Q6ZRF8 634 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 CCDC13Q8IYE1 715 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 GDAP1Q8TB36 358 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 PSMD1Q99460 953 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 AZI2Q9H6S1 392 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 GPRC5CQ9NQ84 441 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 E2F5Q15329 346 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 ANKRD35Q8N283 1001 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 CCDC197Q8NCU1 140 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 AENQ8WTP8 325 aaKnown RBP16.64■□□□□ 0.25
AP4E1-202ENST00000558439 TCP11Q8WWU5 503 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 SLITRK6Q9H5Y7 841 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 SLC16A3O15427 465 aaKnown RBP16.64■□□□□ 0.25
AP4E1-202ENST00000558439 DESP17661 470 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 PMS2P54278 862 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 LRRC14Q15048 493 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 BRDTQ58F21 947 aaPredicted RBP16.64■□□□□ 0.25
AP4E1-202ENST00000558439 SEPT14Q6ZU15 432 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 CYFIP1Q7L576 1253 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 VSIG1Q86XK7 387 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 ZDHHC15Q96MV8 337 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 TTYH3Q9C0H2 523 aa16.64■□□□□ 0.25
AP4E1-202ENST00000558439 MMEP08473 750 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 SPP2Q13103 211 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 HP1BP3Q5SSJ5 553 aaPredicted RBP16.63■□□□□ 0.25
AP4E1-202ENST00000558439 SPATS2Q86XZ4 545 aaKnown RBP16.63■□□□□ 0.25
AP4E1-202ENST00000558439 ATP6V0A1Q93050 837 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 TBC1D31Q96DN5 1066 aa16.63■□□□□ 0.25
AP4E1-202ENST00000558439 THOC1Q96FV9 657 aaKnown RBP16.63■□□□□ 0.25
AP4E1-202ENST00000558439 IQCGQ9H095 443 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms