RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 TCP11Q8WWU5 503 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 PRPF31Q8WWY3 499 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 PPP2R3CQ969Q6 453 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 PABPC5Q96DU9 382 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 CCDC43Q96MW1 224 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 TMEM117Q9H0C3 514 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 DHX33Q9H6R0 707 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 CHST12Q9NRB3 414 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 CLDND1Q9NY35 253 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 COL4A3BPQ9Y5P4 624 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 LOXHD1Q8IVV2 1947 aa13.82□□□□□ -0.2
CDC42BPB-202ENST00000558321 A0A0U1RQF3 1178 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 H3BQ06 376 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 WNT7AO00755 349 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 ASAP2O43150 1006 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 GAS2O43903 313 aaKnown RBP13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 ST18O60284 1047 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 EOMESO95936 686 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 DNAJB1P25685 340 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 LAMTOR4Q0VGL1 99 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 RABEP1Q15276 862 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 ZNF174Q15697 407 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 CSPP1Q1MSJ5 1256 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 LEXMQ3ZCV2 418 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 COLGALT1Q8NBJ5 622 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 FBXO18Q8NFZ0 1043 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 NEK9Q8TD19 979 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 CASD1Q96PB1 797 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 MTMR9Q96QG7 549 aa13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 FOXP1Q9H334 677 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 PIN4Q9Y237 131 aaKnown RBP13.81□□□□□ -0.2
CDC42BPB-202ENST00000558321 FGF18O76093 207 aa13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 SKIP12755 728 aa13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 LAG3P18627 525 aa13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 HYAL1Q12794 435 aa13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 EMC2Q15006 297 aa13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 PUS10Q3MIT2 529 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 PTCRAQ6ISU1 281 aaPredicted RBP13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 MTRQ99707 1265 aa13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 HSD17B14Q9BPX1 270 aa13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 TMEM60Q9H2L4 133 aa13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 ANKEF1Q9NU02 776 aa13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 HCSTQ9UBK5 93 aa13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 PUF60Q9UHX1 559 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 NOL7Q9UMY1 257 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-202ENST00000558321 RALGAPA2Q2PPJ7 1873 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 A0A087WWV3 80 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 TECP42680 631 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 PHKA2P46019 1235 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 UBE3AQ05086 875 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 CAMK1Q14012 370 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 LONRF3Q496Y0 759 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 TTC38Q5R3I4 469 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 SRGAP1Q7Z6B7 1085 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 RBM23Q86U06 439 aaKnown RBP13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 FERMT3Q86UX7 667 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 LRRC43Q8N309 656 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 RNF149Q8NC42 400 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 HELQQ8TDG4 1101 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 PIGOQ8TEQ8 1089 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 ZNF558Q96NG5 402 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 CWH43Q9H720 699 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 IFT122Q9HBG6 1241 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 FAM50BQ9Y247 325 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 KIF3AQ9Y496 699 aa13.79□□□□□ -0.2
CDC42BPB-202ENST00000558321 NLRC5Q86WI3 1866 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 WDR81Q562E7 1941 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 POTEMA6NI47 508 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 LYPLA2O95372 231 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 GTF2F1P35269 517 aaKnown RBP eCLIP13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 IRS1P35568 1242 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 KRT17Q04695 432 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 NCBP1Q09161 790 aaKnown RBP13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 TFDP1Q14186 410 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 MXD4Q14582 209 aaPredicted RBP13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 CLLU1OSQ5K130 101 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 KCNT2Q6UVM3 1135 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 LRRC55Q6ZSA7 311 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 ZNF598Q86UK7 904 aaKnown RBP13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 NOSTRINQ8IVI9 506 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 ERMNQ8TAM6 284 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 PGBD4Q96DM1 585 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 TLE6Q9H808 572 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 TLR9Q9NR96 1032 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 RNF19AQ9NV58 838 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 SPG21Q9NZD8 308 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 TTC28Q96AY4 2481 aa13.78□□□□□ -0.2
CDC42BPB-202ENST00000558321 GRXCR2A6NFK2 248 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 DGAT1O75907 488 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 ERLIN2O94905 339 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 OR52Z1P0C646 297 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 XRCC6P12956 609 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 NRIP1P48552 1158 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 ALDH7A1P49419 539 aaKnown RBP13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 NDUFV1P49821 464 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 RAB27AP51159 221 aa13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 RNASELQ05823 741 aaKnown RBP13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 ORC2Q13416 577 aaPredicted RBP13.77□□□□□ -0.21
CDC42BPB-202ENST00000558321 CLUL1Q15846 466 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms