RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 CATSPER4Q7RTX7 472 aa17.43■□□□□ 0.38
TPM1-211ENST00000558314 TMC7Q7Z402 723 aa17.43■□□□□ 0.38
TPM1-211ENST00000558314 ZNF710Q8N1W2 664 aa17.43■□□□□ 0.38
TPM1-211ENST00000558314 MRPS27Q92552 414 aaKnown RBP17.43■□□□□ 0.38
TPM1-211ENST00000558314 DACT1Q9NYF0 836 aa17.43■□□□□ 0.38
TPM1-211ENST00000558314 MUTYHQ9UIF7 546 aa17.43■□□□□ 0.38
TPM1-211ENST00000558314 INPP5FQ9Y2H2 1132 aa17.43■□□□□ 0.38
TPM1-211ENST00000558314 PFKFB2O60825 505 aa17.42■□□□□ 0.38
TPM1-211ENST00000558314 STBD1O95210 358 aa17.42■□□□□ 0.38
TPM1-211ENST00000558314 SFPQP23246 707 aaKnown RBP eCLIP17.42■□□□□ 0.38
TPM1-211ENST00000558314 PLA2G5P39877 138 aa17.42■□□□□ 0.38
TPM1-211ENST00000558314 POLGP54098 1239 aaPredicted RBP17.42■□□□□ 0.38
TPM1-211ENST00000558314 AK2P54819 239 aa17.42■□□□□ 0.38
TPM1-211ENST00000558314 ANO5Q75V66 913 aa17.42■□□□□ 0.38
TPM1-211ENST00000558314 LPPQ93052 612 aa17.42■□□□□ 0.38
TPM1-211ENST00000558314 MSLNLQ96KJ4 702 aa17.42■□□□□ 0.38
TPM1-211ENST00000558314 CEP170P1Q96L14 293 aa17.42■□□□□ 0.38
TPM1-211ENST00000558314 MBOAT7Q96N66 472 aa17.42■□□□□ 0.38
TPM1-211ENST00000558314 SPG21Q9NZD8 308 aa17.42■□□□□ 0.38
TPM1-211ENST00000558314 USP15Q9Y4E8 981 aaPredicted RBP17.42■□□□□ 0.38
TPM1-211ENST00000558314 A0A0U1RQF3 1178 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 FAM205CA6NFA0 338 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 C19orf67A6NJJ6 358 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 TECP42680 631 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 QARSP47897 775 aaKnown RBP17.41■□□□□ 0.38
TPM1-211ENST00000558314 CYP4A11Q02928 519 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 B3GNT9Q6UX72 402 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 RNF135Q8IUD6 432 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 ZNF579Q8NAF0 562 aaKnown RBP17.41■□□□□ 0.38
TPM1-211ENST00000558314 VN1R2Q8NFZ6 395 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 SLC7A3Q8WY07 619 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 WASF1Q92558 559 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 TMEM143Q96AN5 459 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 RPGRIP1Q96KN7 1286 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 GBP3Q9H0R5 595 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 CYP26B1Q9NR63 512 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 PPP4R2Q9NY27 417 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 VAV3Q9UKW4 847 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 STK36Q9NRP7 1315 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 WDR81Q562E7 1941 aa17.41■□□□□ 0.38
TPM1-211ENST00000558314 HIDE1A8MVS5 230 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 PRR33A8MZF0 331 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 ZC3H11AO75152 810 aaKnown RBP eCLIP17.4■□□□□ 0.38
TPM1-211ENST00000558314 MAFO75444 373 aaPredicted RBP17.4■□□□□ 0.38
TPM1-211ENST00000558314 BAG4O95429 457 aaKnown RBP17.4■□□□□ 0.38
TPM1-211ENST00000558314 CTDNEP1O95476 244 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 SRGAP2CP0DJJ0 459 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 SRGAP2BP0DMP2 458 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 GCFC2P16383 781 aaKnown RBP17.4■□□□□ 0.38
TPM1-211ENST00000558314 SP100P23497 879 aaPredicted RBP17.4■□□□□ 0.38
TPM1-211ENST00000558314 PPM1AP35813 382 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 KRT2P35908 639 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 CDC42EP1Q00587 391 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 COASYQ13057 564 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 NR5A1Q13285 461 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 CTTNQ14247 550 aaKnown RBP17.4■□□□□ 0.38
TPM1-211ENST00000558314 ANKRD1Q15327 319 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 DUSP6Q16828 381 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 EARS2Q5JPH6 523 aaKnown RBP17.4■□□□□ 0.38
TPM1-211ENST00000558314 FAM177A1Q8N128 213 aaPredicted RBP17.4■□□□□ 0.38
TPM1-211ENST00000558314 TMEM87AQ8NBN3 555 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 SMRP1Q8NCR6 262 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 DYDC2Q96IM9 177 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 FAM20AQ96MK3 541 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 CEP89Q96ST8 783 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 JPH2Q9BR39 696 aaPredicted RBP17.4■□□□□ 0.38
TPM1-211ENST00000558314 INO80BQ9C086 356 aaPredicted RBP17.4■□□□□ 0.38
TPM1-211ENST00000558314 BRMS1Q9HCU9 246 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 RGL1Q9NZL6 768 aa17.4■□□□□ 0.38
TPM1-211ENST00000558314 IGKV6-21A0A0C4DH24 114 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 FSCN2O14926 492 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 DKC1O60832 514 aaKnown RBP eCLIP17.39■□□□□ 0.37
TPM1-211ENST00000558314 LARGE1O95461 756 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 EYA4O95677 639 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 EOMESO95936 686 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 P4HBP07237 508 aaKnown RBP17.39■□□□□ 0.37
TPM1-211ENST00000558314 ATF7P17544 494 aaPredicted RBP17.39■□□□□ 0.37
TPM1-211ENST00000558314 PHKA2P46019 1235 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 ALDH7A1P49419 539 aaKnown RBP17.39■□□□□ 0.37
TPM1-211ENST00000558314 PLCB3Q01970 1234 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 RNASELQ05823 741 aaKnown RBP17.39■□□□□ 0.37
TPM1-211ENST00000558314 PPP2R5CQ13362 524 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 XKR9Q5GH70 373 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 PPP4R3AQ6IN85 833 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 PDE12Q6L8Q7 609 aaKnown RBP17.39■□□□□ 0.37
TPM1-211ENST00000558314 ZNF410Q86VK4 478 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 TPH2Q8IWU9 490 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 CDCA3Q99618 268 aaPredicted RBP17.39■□□□□ 0.37
TPM1-211ENST00000558314 NAP1L4Q99733 375 aaKnown RBP17.39■□□□□ 0.37
TPM1-211ENST00000558314 LXNQ9BS40 222 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 MRPL9Q9BYD2 267 aaKnown RBP17.39■□□□□ 0.37
TPM1-211ENST00000558314 KCNMB3Q9NPA1 279 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 CHST12Q9NRB3 414 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 WRAP73Q9P2S5 460 aaPredicted RBP17.39■□□□□ 0.37
TPM1-211ENST00000558314 LZTS1Q9Y250 596 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 COL4A3BPQ9Y5P4 624 aa17.39■□□□□ 0.37
TPM1-211ENST00000558314 BCAR1P56945 870 aa17.38■□□□□ 0.37
TPM1-211ENST00000558314 GLB1LQ6UWU2 654 aa17.38■□□□□ 0.37
TPM1-211ENST00000558314 ZNF598Q86UK7 904 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms