RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 SMAD3P84022 425 aaKnown RBP13.34□□□□□ -0.27
CDK12-203ENST00000558240 NFX1Q12986 1120 aaKnown RBP13.34□□□□□ -0.27
CDK12-203ENST00000558240 FAM102BQ5T8I3 360 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 RRAGBQ5VZM2 374 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 MAEAQ7L5Y9 396 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 SRGAP1Q7Z6B7 1085 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 FAM228AQ86W67 206 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
CDK12-203ENST00000558240 RNF149Q8NC42 400 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 ASAP3Q8TDY4 903 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 LEO1Q8WVC0 666 aaPredicted RBP13.34□□□□□ -0.27
CDK12-203ENST00000558240 RAD54LQ92698 747 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 KIFAP3Q92845 792 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 ZNF668Q96K58 619 aaPredicted RBP13.34□□□□□ -0.27
CDK12-203ENST00000558240 SPATA32Q96LK8 384 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 NLRP4Q96MN2 994 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 NFKBIZQ9BYH8 718 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 POLR3FQ9H1D9 316 aaPredicted RBP13.34□□□□□ -0.27
CDK12-203ENST00000558240 STK17AQ9UEE5 414 aa13.34□□□□□ -0.27
CDK12-203ENST00000558240 RBM19Q9Y4C8 960 aaKnown RBP13.34□□□□□ -0.27
CDK12-203ENST00000558240 ENPP3O14638 875 aa13.33□□□□□ -0.28
CDK12-203ENST00000558240 AMHP03971 560 aa13.33□□□□□ -0.28
CDK12-203ENST00000558240 SSBP05455 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDK12-203ENST00000558240 ATP2A2P16615 1042 aaKnown RBP13.33□□□□□ -0.28
CDK12-203ENST00000558240 SFPQP23246 707 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDK12-203ENST00000558240 PHKA2P46019 1235 aa13.33□□□□□ -0.28
CDK12-203ENST00000558240 PTENP60484 403 aa13.33□□□□□ -0.28
CDK12-203ENST00000558240 CAPSQ13938 189 aa13.33□□□□□ -0.28
CDK12-203ENST00000558240 PPP2R5AQ15172 486 aa13.33□□□□□ -0.28
CDK12-203ENST00000558240 PCBP1Q15365 356 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDK12-203ENST00000558240 SHC4Q6S5L8 630 aa13.33□□□□□ -0.28
CDK12-203ENST00000558240 LRRC15Q8TF66 581 aa13.33□□□□□ -0.28
CDK12-203ENST00000558240 LARP4BQ92615 738 aaKnown RBP13.33□□□□□ -0.28
CDK12-203ENST00000558240 RUSC1Q9BVN2 902 aa13.33□□□□□ -0.28
CDK12-203ENST00000558240 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
CDK12-203ENST00000558240 TMX1Q9H3N1 280 aa13.33□□□□□ -0.28
CDK12-203ENST00000558240 C17orf75Q9HAS0 396 aa13.33□□□□□ -0.28
CDK12-203ENST00000558240 GPRC5CQ9NQ84 441 aa13.33□□□□□ -0.28
CDK12-203ENST00000558240 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.32□□□□□ -0.28
CDK12-203ENST00000558240 MCM6Q14566 821 aa13.32□□□□□ -0.28
CDK12-203ENST00000558240 NAALADL2Q58DX5 795 aa13.32□□□□□ -0.28
CDK12-203ENST00000558240 RESP18Q5W5W9 173 aa13.32□□□□□ -0.28
CDK12-203ENST00000558240 ADALQ6DHV7 355 aa13.32□□□□□ -0.28
CDK12-203ENST00000558240 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.32□□□□□ -0.28
CDK12-203ENST00000558240 RTN4RL1Q86UN2 441 aaPredicted RBP13.32□□□□□ -0.28
CDK12-203ENST00000558240 CHAMP1Q96JM3 812 aa13.32□□□□□ -0.28
CDK12-203ENST00000558240 IFT74Q96LB3 600 aa13.32□□□□□ -0.28
CDK12-203ENST00000558240 DRC1Q96MC2 740 aa13.32□□□□□ -0.28
CDK12-203ENST00000558240 CHST12Q9NRB3 414 aa13.32□□□□□ -0.28
CDK12-203ENST00000558240 TSHZ2Q9NRE2 1034 aa13.32□□□□□ -0.28
CDK12-203ENST00000558240 RNF216Q9NWF9 866 aaPredicted RBP13.32□□□□□ -0.28
CDK12-203ENST00000558240 KCNG1Q9UIX4 513 aa13.32□□□□□ -0.28
CDK12-203ENST00000558240 A0A087X0B3 334 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 DENND3A2RUS2 1198 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 RBAK-RBAKDNI3L0D1 243 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 HIP1RO75146 1068 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 CSDE1O75534 798 aaKnown RBP13.31□□□□□ -0.28
CDK12-203ENST00000558240 ZSCAN20P17040 1043 aaPredicted RBP13.31□□□□□ -0.28
CDK12-203ENST00000558240 STAT6P42226 847 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 NAMPTP43490 491 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 DEFB103AP81534 67 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 DSC3Q14574 896 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 ARSHQ5FYA8 562 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 CDCA2Q69YH5 1023 aaPredicted RBP13.31□□□□□ -0.28
CDK12-203ENST00000558240 SV2BQ7L1I2 683 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 GPBP1Q86WP2 473 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 HERC6Q8IVU3 1022 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 MYOCDQ8IZQ8 938 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 LINC01599Q8WXQ3 324 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 TOP1MTQ969P6 601 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 PANK2Q9BZ23 570 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 C2orf40Q9H1Z8 148 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 MINDY3Q9H8M7 445 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 RGS18Q9NS28 235 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 C1orf112Q9NSG2 853 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 FAM13BQ9NYF5 915 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 CHMP5Q9NZZ3 219 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 CHD9Q3L8U1 2897 aa13.31□□□□□ -0.28
CDK12-203ENST00000558240 FNDC1Q4ZHG4 1894 aaPredicted RBP13.3□□□□□ -0.28
CDK12-203ENST00000558240 LRRIQ4A6NIV6 560 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 GRXCR1A8MXD5 290 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 SOX1O00570 391 aaPredicted RBP13.3□□□□□ -0.28
CDK12-203ENST00000558240 MGEA5O60502 916 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 GJB5O95377 273 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 FGFR4P22455 802 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 CMA1P23946 247 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 MBTD1Q05BQ5 628 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 NCBP1Q09161 790 aaKnown RBP13.3□□□□□ -0.28
CDK12-203ENST00000558240 MAPK7Q13164 816 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 DHX8Q14562 1220 aaKnown RBP13.3□□□□□ -0.28
CDK12-203ENST00000558240 FAM109BQ6ICB4 259 aaPredicted RBP13.3□□□□□ -0.28
CDK12-203ENST00000558240 GPR153Q6NV75 609 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 SLC24A5Q71RS6 500 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 CATSPER4Q7RTX7 472 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 ZBTB8OSQ8IWT0 167 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 DAW1Q8N136 415 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 PDILTQ8N807 584 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 IQUBQ8NA54 791 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 BSNDQ8WZ55 320 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms