RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 CTTNQ14247 550 aaKnown RBP9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 SKIV2LQ15477 1246 aaKnown RBP9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 TJAP1Q5JTD0 557 aa9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 FAM102BQ5T8I3 360 aa9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 CMTR2Q8IYT2 770 aaKnown RBP9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 MRPL38Q96DV4 380 aaKnown RBP9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 CEP170P1Q96L14 293 aa9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 ASB2Q96Q27 587 aa9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 EIF2AK1Q9BQI3 630 aaKnown RBP9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 DHX33Q9H6R0 707 aaKnown RBP9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 ZSWIM4Q9H7M6 989 aa9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 TTC12Q9H892 705 aaPredicted RBP9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 SUCLA2Q9P2R7 463 aaPredicted RBP9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 PCDHB7Q9Y5E2 793 aa9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 MRPL42Q9Y6G3 142 aaKnown RBP9.83□□□□□ -0.84
SNRPA1-206ENST00000558059 A0A087WZ62 844 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 LYPLA2O95372 231 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 IBSPP21815 317 aaPredicted RBP9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 YWHABP31946 246 aaKnown RBP9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 MCM7P33993 719 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 MRPS5P82675 430 aaKnown RBP9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 TFF2Q03403 129 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 ZNF174Q15697 407 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 PAN2Q504Q3 1202 aaKnown RBP9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 NOSTRINQ8IVI9 506 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 KSR1Q8IVT5 923 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 TPH2Q8IWU9 490 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 FAM184AQ8NB25 1140 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 IL27Q8NEV9 243 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 NLRP7Q8WX94 980 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 TMX3Q96JJ7 454 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 TBC1D32Q96NH3 1257 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 JPH2Q9BR39 696 aaPredicted RBP9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 FDXACB1Q9BRP7 624 aaPredicted RBP9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 GCOM2Q9BZD3 368 aaPredicted RBP9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 ELAC1Q9H777 363 aaKnown RBP9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 RNF19AQ9NV58 838 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 LRFN2Q9ULH4 789 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 RWDD3Q9Y3V2 267 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 PPME1Q9Y570 386 aa9.82□□□□□ -0.84
SNRPA1-206ENST00000558059 PLXNA4Q9HCM2 1894 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 GRM6O15303 877 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 ZSCAN20P17040 1043 aaPredicted RBP9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 U2AF2P26368 475 aaKnown RBP eCLIP9.81□□□□□ -0.842e-6■□□□□ 8.1
SNRPA1-206ENST00000558059 RFC5P40937 340 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 TOB1P50616 345 aaPredicted RBP9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 PTPROQ16827 1216 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 XKR9Q5GH70 373 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 VARS2Q5ST30 1063 aaKnown RBP9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 OTUD6AQ7L8S5 288 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 ZNF598Q86UK7 904 aaKnown RBP9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 ZNF410Q86VK4 478 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 ECHDC2Q86YB7 292 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 RHPN2Q8IUC4 686 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 EXOC8Q8IYI6 725 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 C4orf32Q8N8J7 132 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 NEK9Q8TD19 979 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 PRPF31Q8WWY3 499 aaKnown RBP9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 SLC7A3Q8WY07 619 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 TMEM143Q96AN5 459 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 SCLT1Q96NL6 688 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 C11orf84Q9BUA3 381 aaPredicted RBP9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 PLVAPQ9BX97 442 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 UPF2Q9HAU5 1272 aaKnown RBP9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 IFT122Q9HBG6 1241 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 XPNPEP1Q9NQW7 623 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 ANKEF1Q9NU02 776 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 TMEM161AQ9NX61 479 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 COG5Q9UP83 839 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 PLAGL2Q9UPG8 496 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 COL4A3BPQ9Y5P4 624 aa9.81□□□□□ -0.84
SNRPA1-206ENST00000558059 A0A087WWV3 80 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 A0A0U1RQF3 1178 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 TBKBP1A7MCY6 615 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 SPATA31C1P0DKV0 1188 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 FGFR1P11362 822 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 BMP1P13497 986 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 ATF7P17544 494 aaPredicted RBP9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 TRAPPC10P48553 1259 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 POLGP54098 1239 aaPredicted RBP9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 LAMTOR4Q0VGL1 99 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 ORC2Q13416 577 aaPredicted RBP9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 CAMK1Q14012 370 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 NBR1Q14596 966 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 EMC2Q15006 297 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 TTC38Q5R3I4 469 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 SPPL3Q8TCT6 385 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 PSPC1Q8WXF1 523 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 SYMPKQ92797 1274 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 P2RX5Q93086 422 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 HLA-CQ95604 372 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 RNF166Q96A37 237 aaPredicted RBP9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 NLRP4Q96MN2 994 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 CASD1Q96PB1 797 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 INO80BQ9C086 356 aaPredicted RBP9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 LMAN2LQ9H0V9 348 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 ATP6V0A4Q9HBG4 840 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 ALG13Q9NP73 1137 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 CHST12Q9NRB3 414 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms