RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 CAP1Q01518 475 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 ALCAMQ13740 583 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 OLFML2BQ68BL8 750 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 PPFIBP1Q86W92 1011 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 SPIRE2Q8WWL2 714 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 IFT74Q96LB3 600 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 NTPCRQ9BSD7 190 aaKnown RBP22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 SUGCTQ9HAC7 445 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 ERAP1Q9NZ08 941 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 TBX20Q9UMR3 447 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 ZSWIM8A7E2V4 1837 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 ITIH6Q6UXX5 1313 aa22.4■■□□□ 1.18
SNRPA1-205ENST00000558036 MAFO75444 373 aaPredicted RBP22.39■■□□□ 1.18
SNRPA1-205ENST00000558036 ALDH1A1P00352 501 aa22.39■■□□□ 1.18
SNRPA1-205ENST00000558036 GLRA2P23416 452 aa22.39■■□□□ 1.18
SNRPA1-205ENST00000558036 YY1P25490 414 aa22.39■■□□□ 1.18
SNRPA1-205ENST00000558036 RFC5P40937 340 aa22.39■■□□□ 1.18
SNRPA1-205ENST00000558036 FXR1P51114 621 aaKnown RBP eCLIP22.39■■□□□ 1.18
SNRPA1-205ENST00000558036 HTRA3P83110 453 aa22.39■■□□□ 1.18
SNRPA1-205ENST00000558036 LACTBP83111 547 aaPredicted RBP22.39■■□□□ 1.18
SNRPA1-205ENST00000558036 LRRC71Q8N4P6 559 aa22.39■■□□□ 1.18
SNRPA1-205ENST00000558036 PCIF1Q9H4Z3 704 aa22.39■■□□□ 1.18
SNRPA1-205ENST00000558036 TMEM206Q9H813 350 aa22.39■■□□□ 1.18
SNRPA1-205ENST00000558036 DNAH12Q6ZR08 3092 aa22.39■■□□□ 1.17
SNRPA1-205ENST00000558036 ARL2P36404 184 aa22.39■■□□□ 1.17
SNRPA1-205ENST00000558036 APLP1P51693 650 aa22.39■■□□□ 1.17
SNRPA1-205ENST00000558036 MARSP56192 900 aaKnown RBP22.39■■□□□ 1.17
SNRPA1-205ENST00000558036 RTP1P59025 263 aa22.39■■□□□ 1.17
SNRPA1-205ENST00000558036 CBWD1Q9BRT8 395 aa22.39■■□□□ 1.17
SNRPA1-205ENST00000558036 ARMCX3Q9UH62 379 aaPredicted RBP22.39■■□□□ 1.17
SNRPA1-205ENST00000558036 GABRQQ9UN88 632 aa22.39■■□□□ 1.17
SNRPA1-205ENST00000558036 USP20Q9Y2K6 914 aa22.39■■□□□ 1.17
SNRPA1-205ENST00000558036 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.39■■□□□ 1.17
SNRPA1-205ENST00000558036 DYNC1LI2O43237 492 aaPredicted RBP22.38■■□□□ 1.17
SNRPA1-205ENST00000558036 SLC26A2P50443 739 aa22.38■■□□□ 1.17
SNRPA1-205ENST00000558036 IGBP1P78318 339 aa22.38■■□□□ 1.17
SNRPA1-205ENST00000558036 FKBP15Q5T1M5 1219 aa22.38■■□□□ 1.17
SNRPA1-205ENST00000558036 PCMTD1Q96MG8 357 aaPredicted RBP22.38■■□□□ 1.17
SNRPA1-205ENST00000558036 C16orf70Q9BSU1 422 aa22.38■■□□□ 1.17
SNRPA1-205ENST00000558036 A0A1W2PQC6 194 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 LRRIQ4A6NIV6 560 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 MMP3P08254 477 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 FCGRTP55899 365 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 MKRN4PQ13434 485 aaPredicted RBP22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 TAS1R3Q7RTX0 852 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 RDH13Q8NBN7 331 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 ZSWIM2Q8NEG5 633 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 KIAA1524Q8TCG1 905 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 AKR1B15C9JRZ8 316 aaPredicted RBP22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 ANKRD63C9JTQ0 380 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 PPFIA4O75335 1185 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 EPB41P11171 864 aaKnown RBP22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 MAP4K3Q8IVH8 894 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 SLC17A8Q8NDX2 589 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 PRPF31Q8WWY3 499 aaKnown RBP22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 DMAC2Q9NW81 257 aa22.37■■□□□ 1.17
SNRPA1-205ENST00000558036 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.37■■□□□ 1.175e-8■□□□□ 11.1
SNRPA1-205ENST00000558036 DCAF17Q5H9S7 520 aaPredicted RBP22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 FRMD5Q7Z6J6 570 aa22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 FAM186BQ8IYM0 893 aa22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 GOLGA5Q8TBA6 731 aa22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 ARHGAP28Q9P2N2 729 aa22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 GNEQ9Y223 722 aaKnown RBP22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 H3BRB1 525 aa22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 SLC16A3O15427 465 aaKnown RBP22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 HBP1O60381 514 aa22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 GJB1P08034 283 aa22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 INSRRP14616 1297 aa22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 NFIL3Q16649 462 aa22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 PPP1R13LQ8WUF5 828 aa22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 ERGIC2Q96RQ1 377 aa22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 TUT1Q9H6E5 874 aaKnown RBP22.36■■□□□ 1.17
SNRPA1-205ENST00000558036 TTC26A0AVF1 554 aa22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 EXOC3O60645 756 aa22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 MFAP3LO75121 409 aa22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 TRPA1O75762 1119 aa22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 ADSSP30520 456 aa22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 PSMC2P35998 433 aaKnown RBP22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 FLT3LGP49771 235 aa22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 CHMP4BP1P59074 171 aa22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 KCNH2Q12809 1159 aa22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 CAPSQ13938 189 aa22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 TCERG1LQ5VWI1 586 aa22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 METTL13Q8N6R0 699 aa22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 ZNF668Q96K58 619 aaPredicted RBP22.35■■□□□ 1.17
SNRPA1-205ENST00000558036 IGHA2P01877 340 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 XRCC5P13010 732 aaKnown RBP22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 TRIM21P19474 475 aaKnown RBP22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 CNGA1P29973 690 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 NAMPTP43490 491 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 PRKCZQ05513 592 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 DGKDQ16760 1214 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 SLC39A4Q6P5W5 647 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 TLK2Q86UE8 772 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 DEPTORQ8TB45 409 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 BORCS6Q96GS4 357 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 CRACR2AQ9BSW2 395 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 FAM207AQ9NSI2 230 aaPredicted RBP22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 SIK3Q9Y2K2 1263 aa22.34■■□□□ 1.17
SNRPA1-205ENST00000558036 FRMD4BQ9Y2L6 1034 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms