RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 WDR81Q562E7 1941 aa15.9■□□□□ 0.14
USP3-205ENST00000557884 A0A087X0B3 334 aa15.9■□□□□ 0.14
USP3-205ENST00000557884 NPHP3-ACAD11A0A0J9YXS1 232 aa15.9■□□□□ 0.14
USP3-205ENST00000557884 ABHD14A-ACY1A0A1B0GW23 586 aa15.9■□□□□ 0.14
USP3-205ENST00000557884 GRXCR1A8MXD5 290 aa15.9■□□□□ 0.14
USP3-205ENST00000557884 KCNJ6P48051 423 aa15.9■□□□□ 0.14
USP3-205ENST00000557884 DEFB103AP81534 67 aa15.9■□□□□ 0.14
USP3-205ENST00000557884 CAPSQ13938 189 aa15.9■□□□□ 0.14
USP3-205ENST00000557884 MXD4Q14582 209 aaPredicted RBP15.9■□□□□ 0.14
USP3-205ENST00000557884 C1orf186Q6ZWK4 172 aa15.9■□□□□ 0.14
USP3-205ENST00000557884 TMCO2Q7Z6W1 182 aaPredicted RBP15.9■□□□□ 0.14
USP3-205ENST00000557884 GPBP1Q86WP2 473 aa15.9■□□□□ 0.14
USP3-205ENST00000557884 LINC01599Q8WXQ3 324 aa15.9■□□□□ 0.14
USP3-205ENST00000557884 BSNDQ8WZ55 320 aa15.9■□□□□ 0.14
USP3-205ENST00000557884 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.89■□□□□ 0.13
USP3-205ENST00000557884 LRRIQ4A6NIV6 560 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 GPR182O15218 404 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 ASAP2O43150 1006 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 HIP1RO75146 1068 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 ATP2A2P16615 1042 aaKnown RBP15.89■□□□□ 0.13
USP3-205ENST00000557884 PHKA2P46019 1235 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 TFDP1Q14186 410 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 NAALADL2Q58DX5 795 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 CCDC73Q6ZRK6 1079 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 MYOCDQ8IZQ8 938 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 KCTD17Q8N5Z5 321 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 LARP4BQ92615 738 aaKnown RBP15.89■□□□□ 0.13
USP3-205ENST00000557884 SCAND2PQ9GZW5 306 aaPredicted RBP15.89■□□□□ 0.13
USP3-205ENST00000557884 MINDY3Q9H8M7 445 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 IFT122Q9HBG6 1241 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 CHMP5Q9NZZ3 219 aa15.89■□□□□ 0.13
USP3-205ENST00000557884 TET1Q8NFU7 2136 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 SOX1O00570 391 aaPredicted RBP15.88■□□□□ 0.13
USP3-205ENST00000557884 MGEA5O60502 916 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 EFCAB14O75071 495 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 STAT6P42226 847 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 PTENP60484 403 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 ARSHQ5FYA8 562 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 RESP18Q5W5W9 173 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 FAM117BQ6P1L5 589 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 CATSPER4Q7RTX7 472 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 DAW1Q8N136 415 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 KIFAP3Q92845 792 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 KIFC3Q9BVG8 833 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 STK17AQ9UEE5 414 aa15.88■□□□□ 0.13
USP3-205ENST00000557884 DENND3A2RUS2 1198 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 SFI1A8K8P3 1242 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 ENPP3O14638 875 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 UPP2O95045 317 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 AMHP03971 560 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 KRT18P05783 430 aaKnown RBP15.87■□□□□ 0.13
USP3-205ENST00000557884 SFPQP23246 707 aaKnown RBP eCLIP15.87■□□□□ 0.13
USP3-205ENST00000557884 GUCY2CP25092 1073 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 RABGGTBP53611 331 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 MAPK7Q13164 816 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 LRIT3Q3SXY7 679 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 ODR4Q5SWX8 454 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 SRGAP1Q7Z6B7 1085 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 RTN4RL1Q86UN2 441 aaPredicted RBP15.87■□□□□ 0.13
USP3-205ENST00000557884 DHX58Q96C10 678 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 IFT74Q96LB3 600 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 DRC1Q96MC2 740 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 IPO9Q96P70 1041 aaKnown RBP15.87■□□□□ 0.13
USP3-205ENST00000557884 SLC9A7Q96T83 725 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 ADAM2Q99965 735 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 FTHL17Q9BXU8 183 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 INO80BQ9C086 356 aaPredicted RBP15.87■□□□□ 0.13
USP3-205ENST00000557884 FAM13BQ9NYF5 915 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 MYH15Q9Y2K3 1946 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 ARID2Q68CP9 1835 aa15.87■□□□□ 0.13
USP3-205ENST00000557884 EVPLQ92817 2033 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.86■□□□□ 0.13
USP3-205ENST00000557884 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.86■□□□□ 0.13
USP3-205ENST00000557884 CCDC169A6NNP5 214 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 INO80B-WBP1J3KQ70 363 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 POLR2DO15514 142 aaKnown RBP15.86■□□□□ 0.13
USP3-205ENST00000557884 LIG1P18858 919 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 PBX2P40425 430 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 PEX3P56589 373 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 MBTD1Q05BQ5 628 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 SV2BQ7L1I2 683 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 HERC6Q8IVU3 1022 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 DEPTORQ8TB45 409 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 LRCH3Q96II8 777 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 REEP2Q9BRK0 252 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 TIPINQ9BVW5 301 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 TSPYL2Q9H2G4 693 aaPredicted RBP15.86■□□□□ 0.13
USP3-205ENST00000557884 PIN4Q9Y237 131 aaKnown RBP15.86■□□□□ 0.13
USP3-205ENST00000557884 SIP14410 1827 aa15.86■□□□□ 0.13
USP3-205ENST00000557884 A0A1B0GVL5 298 aa15.85■□□□□ 0.13
USP3-205ENST00000557884 DSC3Q14574 896 aa15.85■□□□□ 0.13
USP3-205ENST00000557884 PPP2R5AQ15172 486 aa15.85■□□□□ 0.13
USP3-205ENST00000557884 E2F4Q16254 413 aa15.85■□□□□ 0.13
USP3-205ENST00000557884 ADALQ6DHV7 355 aa15.85■□□□□ 0.13
USP3-205ENST00000557884 DYMQ7RTS9 669 aa15.85■□□□□ 0.13
USP3-205ENST00000557884 ZBTB8OSQ8IWT0 167 aa15.85■□□□□ 0.13
USP3-205ENST00000557884 PHOSPHO2Q8TCD6 241 aa15.85■□□□□ 0.13
USP3-205ENST00000557884 STAMQ92783 540 aa15.85■□□□□ 0.13
USP3-205ENST00000557884 ZBED2Q9BTP6 218 aa15.85■□□□□ 0.13
USP3-205ENST00000557884 ZHX3Q9H4I2 956 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms