RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 BARX2Q9UMQ3 279 aaPredicted RBP16.41■□□□□ 0.22
SHMT2-235ENST00000557740 LZTS1Q9Y250 596 aa16.41■□□□□ 0.22
SHMT2-235ENST00000557740 A0A087WZ62 844 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 A0A0U1RQF3 1178 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 EML1O00423 815 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 TBX3O15119 743 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 DTNBO60941 627 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 MAFO75444 373 aaPredicted RBP16.4■□□□□ 0.22
SHMT2-235ENST00000557740 EOMESO95936 686 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 SRGAP2BP0DMP2 458 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 CLLU1OSQ5K130 101 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 PLPP4Q5VZY2 271 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 TWF2Q6IBS0 349 aaKnown RBP16.4■□□□□ 0.22
SHMT2-235ENST00000557740 KCNT2Q6UVM3 1135 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 SMRP1Q8NCR6 262 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 HELQQ8TDG4 1101 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 SLC7A3Q8WY07 619 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 MRPS27Q92552 414 aaKnown RBP16.4■□□□□ 0.22
SHMT2-235ENST00000557740 NLRP4Q96MN2 994 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 CEP89Q96ST8 783 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 FDXACB1Q9BRP7 624 aaPredicted RBP16.4■□□□□ 0.22
SHMT2-235ENST00000557740 MRPL9Q9BYD2 267 aaKnown RBP16.4■□□□□ 0.22
SHMT2-235ENST00000557740 CYP26B1Q9NR63 512 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 GJB4Q9NTQ9 266 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 CLEC1BQ9P126 229 aa16.4■□□□□ 0.22
SHMT2-235ENST00000557740 PIN4Q9Y237 131 aaKnown RBP16.4■□□□□ 0.22
SHMT2-235ENST00000557740 C19orf67A6NJJ6 358 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 FSCN2O14926 492 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 PER2O15055 1255 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 EIF5BO60841 1220 aaKnown RBP16.39■□□□□ 0.21
SHMT2-235ENST00000557740 CTDNEP1O95476 244 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 EYA4O95677 639 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 P4HBP07237 508 aaKnown RBP16.39■□□□□ 0.21
SHMT2-235ENST00000557740 KRT2P35908 639 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 PBX3P40426 434 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 POLGP54098 1239 aaPredicted RBP16.39■□□□□ 0.21
SHMT2-235ENST00000557740 ERVFC1P60507 584 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 PLCB3Q01970 1234 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 KRT17Q04695 432 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 COASYQ13057 564 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 NCAPH2Q6IBW4 605 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 LRRC55Q6ZSA7 311 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 CATSPER4Q7RTX7 472 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 ZNF598Q86UK7 904 aaKnown RBP16.39■□□□□ 0.21
SHMT2-235ENST00000557740 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 EXOC8Q8IYI6 725 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 CEP170P1Q96L14 293 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 TCF25Q9BQ70 676 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 LXNQ9BS40 222 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 SPG21Q9NZD8 308 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 PPME1Q9Y570 386 aa16.39■□□□□ 0.21
SHMT2-235ENST00000557740 FNDC1Q4ZHG4 1894 aaPredicted RBP16.39■□□□□ 0.21
SHMT2-235ENST00000557740 PRR33A8MZF0 331 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 BAG4O95429 457 aaKnown RBP16.38■□□□□ 0.21
SHMT2-235ENST00000557740 GLP2RO95838 553 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 SKIP12755 728 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 ATF7P17544 494 aaPredicted RBP16.38■□□□□ 0.21
SHMT2-235ENST00000557740 RFC5P40937 340 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 RAB27AP51159 221 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 NPEPPSP55786 919 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 DUSP6Q16828 381 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 ERICH6BQ5W0A0 696 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 SLFN12Q8IYM2 578 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 NECAB1Q8N987 351 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 RSPH1Q8WYR4 309 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 HAS1Q92839 578 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 GTF3C6Q969F1 213 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 FAM122AQ96E09 287 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 NGRNQ9NPE2 291 aaKnown RBP16.38■□□□□ 0.21
SHMT2-235ENST00000557740 USP15Q9Y4E8 981 aaPredicted RBP16.38■□□□□ 0.21
SHMT2-235ENST00000557740 COL4A3BPQ9Y5P4 624 aa16.38■□□□□ 0.21
SHMT2-235ENST00000557740 WDR81Q562E7 1941 aa16.37■□□□□ 0.21
SHMT2-235ENST00000557740 FAM205CA6NFA0 338 aa16.37■□□□□ 0.21
SHMT2-235ENST00000557740 PLA2G5P39877 138 aa16.37■□□□□ 0.21
SHMT2-235ENST00000557740 PHKA2P46019 1235 aa16.37■□□□□ 0.21
SHMT2-235ENST00000557740 NR5A1Q13285 461 aa16.37■□□□□ 0.21
SHMT2-235ENST00000557740 EPHA7Q15375 998 aa16.37■□□□□ 0.21
SHMT2-235ENST00000557740 TMC7Q7Z402 723 aa16.37■□□□□ 0.21
SHMT2-235ENST00000557740 KSR1Q8IVT5 923 aa16.37■□□□□ 0.21
SHMT2-235ENST00000557740 PSPC1Q8WXF1 523 aaKnown RBP16.37■□□□□ 0.21
SHMT2-235ENST00000557740 WRAP73Q9P2S5 460 aaPredicted RBP16.37■□□□□ 0.21
SHMT2-235ENST00000557740 PLXNA4Q9HCM2 1894 aa16.37■□□□□ 0.21
SHMT2-235ENST00000557740 GAS2O43903 313 aaKnown RBP16.36■□□□□ 0.21
SHMT2-235ENST00000557740 LARGE1O95461 756 aa16.36■□□□□ 0.21
SHMT2-235ENST00000557740 FDPSP14324 419 aaKnown RBP16.36■□□□□ 0.21
SHMT2-235ENST00000557740 YWHABP31946 246 aaKnown RBP16.36■□□□□ 0.21
SHMT2-235ENST00000557740 ALDH7A1P49419 539 aaKnown RBP16.36■□□□□ 0.21
SHMT2-235ENST00000557740 FOSBP53539 338 aa16.36■□□□□ 0.21
SHMT2-235ENST00000557740 RBM10P98175 930 aaKnown RBP16.36■□□□□ 0.21
SHMT2-235ENST00000557740 TRIM29Q14134 588 aa16.36■□□□□ 0.21
SHMT2-235ENST00000557740 EMC2Q15006 297 aa16.36■□□□□ 0.21
SHMT2-235ENST00000557740 ME3Q16798 604 aa16.36■□□□□ 0.21
SHMT2-235ENST00000557740 EARS2Q5JPH6 523 aaKnown RBP16.36■□□□□ 0.21
SHMT2-235ENST00000557740 GLB1LQ6UWU2 654 aa16.36■□□□□ 0.21
SHMT2-235ENST00000557740 OTUD6AQ7L8S5 288 aa16.36■□□□□ 0.21
SHMT2-235ENST00000557740 C4orf19Q8IY42 314 aa16.36■□□□□ 0.21
SHMT2-235ENST00000557740 VN1R2Q8NFZ6 395 aa16.36■□□□□ 0.21
SHMT2-235ENST00000557740 TMEM143Q96AN5 459 aa16.36■□□□□ 0.21
SHMT2-235ENST00000557740 TRAIPQ9BWF2 469 aa16.36■□□□□ 0.21
SHMT2-235ENST00000557740 DHX33Q9H6R0 707 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms