RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CHST12Q9NRB3 414 aa17.96■□□□□ 0.47
SCFD1-224ENST00000557713 DACT1Q9NYF0 836 aa17.96■□□□□ 0.47
SCFD1-224ENST00000557713 WDFY4Q6ZS81 3184 aa17.95■□□□□ 0.46
SCFD1-224ENST00000557713 ZNF318Q5VUA4 2279 aa17.95■□□□□ 0.46
SCFD1-224ENST00000557713 TMEM150BA6NC51 233 aa17.95■□□□□ 0.46
SCFD1-224ENST00000557713 REC8O95072 547 aa17.95■□□□□ 0.46
SCFD1-224ENST00000557713 TDP2O95551 362 aa17.95■□□□□ 0.46
SCFD1-224ENST00000557713 HOXB8P17481 243 aaPredicted RBP17.95■□□□□ 0.46
SCFD1-224ENST00000557713 SSRP1Q08945 709 aaKnown RBP17.95■□□□□ 0.46
SCFD1-224ENST00000557713 NPY5RQ15761 445 aa17.95■□□□□ 0.46
SCFD1-224ENST00000557713 MTERF2Q49AM1 385 aa17.95■□□□□ 0.46
SCFD1-224ENST00000557713 LLGL2Q6P1M3 1020 aa17.95■□□□□ 0.46
SCFD1-224ENST00000557713 TRIM22Q8IYM9 498 aa17.95■□□□□ 0.46
SCFD1-224ENST00000557713 SCLT1Q96NL6 688 aa17.95■□□□□ 0.46
SCFD1-224ENST00000557713 GCOM2Q9BZD3 368 aaPredicted RBP17.95■□□□□ 0.46
SCFD1-224ENST00000557713 SEPT9Q9UHD8 586 aaPredicted RBP17.95■□□□□ 0.46
SCFD1-224ENST00000557713 PIEZO1Q92508 2521 aa17.94■□□□□ 0.46
SCFD1-224ENST00000557713 A0A087WZ62 844 aa17.94■□□□□ 0.46
SCFD1-224ENST00000557713 C2orf71A6NGG8 1288 aa17.94■□□□□ 0.46
SCFD1-224ENST00000557713 MAFO75444 373 aaPredicted RBP17.94■□□□□ 0.46
SCFD1-224ENST00000557713 DEXIO95424 95 aa17.94■□□□□ 0.46
SCFD1-224ENST00000557713 PHKA2P46019 1235 aa17.94■□□□□ 0.46
SCFD1-224ENST00000557713 MOXD1Q6UVY6 613 aa17.94■□□□□ 0.46
SCFD1-224ENST00000557713 BLIDQ8IZY5 108 aa17.94■□□□□ 0.46
SCFD1-224ENST00000557713 DAGLBQ8NCG7 672 aa17.94■□□□□ 0.46
SCFD1-224ENST00000557713 ETNPPLQ8TBG4 499 aa17.94■□□□□ 0.46
SCFD1-224ENST00000557713 ZNF274Q96GC6 653 aaPredicted RBP17.94■□□□□ 0.46
SCFD1-224ENST00000557713 SH2D3AQ9BRG2 576 aa17.94■□□□□ 0.46
SCFD1-224ENST00000557713 FDXACB1Q9BRP7 624 aaPredicted RBP17.94■□□□□ 0.46
SCFD1-224ENST00000557713 APOL5Q9BWW9 433 aa17.94■□□□□ 0.46
SCFD1-224ENST00000557713 EPB41L2O43491 1005 aaKnown RBP17.93■□□□□ 0.46
SCFD1-224ENST00000557713 DNM2P50570 870 aa17.93■□□□□ 0.46
SCFD1-224ENST00000557713 BCAR1P56945 870 aa17.93■□□□□ 0.46
SCFD1-224ENST00000557713 SIGLEC14Q08ET2 396 aa17.93■□□□□ 0.46
SCFD1-224ENST00000557713 SMC1AQ14683 1233 aaKnown RBP17.93■□□□□ 0.46
SCFD1-224ENST00000557713 IER5LQ5T953 404 aa17.93■□□□□ 0.46
SCFD1-224ENST00000557713 FBXL6Q8N531 539 aa17.93■□□□□ 0.46
SCFD1-224ENST00000557713 PRSS33Q8NF86 280 aa17.93■□□□□ 0.46
SCFD1-224ENST00000557713 CASP10Q92851 521 aa17.93■□□□□ 0.46
SCFD1-224ENST00000557713 ASIC4Q96FT7 647 aa17.93■□□□□ 0.46
SCFD1-224ENST00000557713 MRPL9Q9BYD2 267 aaKnown RBP17.93■□□□□ 0.46
SCFD1-224ENST00000557713 DDX11L8A8MPP1 907 aa17.92■□□□□ 0.46
SCFD1-224ENST00000557713 NT5C1B-RDH14C9J2C7 533 aa17.92■□□□□ 0.46
SCFD1-224ENST00000557713 CLASP2O75122 1294 aaKnown RBP17.92■□□□□ 0.46
SCFD1-224ENST00000557713 ALDH7A1P49419 539 aaKnown RBP17.92■□□□□ 0.46
SCFD1-224ENST00000557713 PTPN21Q16825 1174 aa17.92■□□□□ 0.46
SCFD1-224ENST00000557713 GALNT17Q6IS24 598 aa17.92■□□□□ 0.46
SCFD1-224ENST00000557713 ANO5Q75V66 913 aa17.92■□□□□ 0.46
SCFD1-224ENST00000557713 ZNF410Q86VK4 478 aa17.92■□□□□ 0.46
SCFD1-224ENST00000557713 FAM177A1Q8N128 213 aaPredicted RBP17.92■□□□□ 0.46
SCFD1-224ENST00000557713 AIFM3Q96NN9 605 aa17.92■□□□□ 0.46
SCFD1-224ENST00000557713 INO80BQ9C086 356 aaPredicted RBP17.92■□□□□ 0.46
SCFD1-224ENST00000557713 SUCLA2Q9P2R7 463 aaPredicted RBP17.92■□□□□ 0.46
SCFD1-224ENST00000557713 HCFC2Q9Y5Z7 792 aa17.92■□□□□ 0.46
SCFD1-224ENST00000557713 CYP46A1Q9Y6A2 500 aa17.92■□□□□ 0.46
SCFD1-224ENST00000557713 CPLX1O14810 134 aa17.91■□□□□ 0.46
SCFD1-224ENST00000557713 CXCL14O95715 111 aa17.91■□□□□ 0.46
SCFD1-224ENST00000557713 SFPQP23246 707 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCFD1-224ENST00000557713 NONOQ15233 471 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCFD1-224ENST00000557713 TPRNQ4KMQ1 711 aa17.91■□□□□ 0.46
SCFD1-224ENST00000557713 RHPN2Q8IUC4 686 aa17.91■□□□□ 0.46
SCFD1-224ENST00000557713 KSR1Q8IVT5 923 aa17.91■□□□□ 0.46
SCFD1-224ENST00000557713 SUGP1Q8IWZ8 645 aaKnown RBP17.91■□□□□ 0.46
SCFD1-224ENST00000557713 RSPH1Q8WYR4 309 aa17.91■□□□□ 0.46
SCFD1-224ENST00000557713 LARP6Q9BRS8 491 aaKnown RBP17.91■□□□□ 0.46
SCFD1-224ENST00000557713 TM6SF1Q9BZW5 370 aa17.91■□□□□ 0.46
SCFD1-224ENST00000557713 ADAM7Q9H2U9 754 aa17.91■□□□□ 0.46
SCFD1-224ENST00000557713 CDH22Q9UJ99 828 aa17.91■□□□□ 0.46
SCFD1-224ENST00000557713 EML1O00423 815 aa17.9■□□□□ 0.46
SCFD1-224ENST00000557713 ZNF623O75123 536 aa17.9■□□□□ 0.46
SCFD1-224ENST00000557713 SKIP12755 728 aa17.9■□□□□ 0.46
SCFD1-224ENST00000557713 PSMC5P62195 406 aa17.9■□□□□ 0.46
SCFD1-224ENST00000557713 ITIH3Q06033 890 aa17.9■□□□□ 0.46
SCFD1-224ENST00000557713 TWF2Q6IBS0 349 aaKnown RBP17.9■□□□□ 0.46
SCFD1-224ENST00000557713 TMEM173Q86WV6 379 aaPredicted RBP17.9■□□□□ 0.46
SCFD1-224ENST00000557713 LPPQ93052 612 aa17.9■□□□□ 0.46
SCFD1-224ENST00000557713 TMEM169Q96HH4 297 aa17.9■□□□□ 0.46
SCFD1-224ENST00000557713 PRRX2Q99811 253 aa17.9■□□□□ 0.46
SCFD1-224ENST00000557713 ZBP1Q9H171 429 aa17.9■□□□□ 0.46
SCFD1-224ENST00000557713 IFT122Q9HBG6 1241 aa17.9■□□□□ 0.46
SCFD1-224ENST00000557713 DDX25Q9UHL0 483 aaKnown RBP17.9■□□□□ 0.46
SCFD1-224ENST00000557713 PIN4Q9Y237 131 aaKnown RBP17.9■□□□□ 0.46
SCFD1-224ENST00000557713 IRAK3Q9Y616 596 aa17.9■□□□□ 0.46
SCFD1-224ENST00000557713 MEIS3P2A8K0S8 358 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 SLC37A4O43826 429 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 OFD1O75665 1012 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 GALTP07902 379 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 INF2Q27J81 1249 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 LONRF3Q496Y0 759 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 KRT25Q7Z3Z0 450 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 DDX53Q86TM3 631 aaKnown RBP17.89■□□□□ 0.45
SCFD1-224ENST00000557713 VPS52Q8N1B4 723 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 IGSF21Q96ID5 467 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 PHOX2BQ99453 314 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 JPH2Q9BR39 696 aaPredicted RBP17.89■□□□□ 0.45
SCFD1-224ENST00000557713 NRDE2Q9H7Z3 1164 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 KCNMB3Q9NPA1 279 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 CYP26B1Q9NR63 512 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 FAM105AQ9NUU6 356 aa17.89■□□□□ 0.45
SCFD1-224ENST00000557713 TBC1D13Q9NVG8 400 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms