RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 IFT122Q9HBG6 1241 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 C1orf112Q9NSG2 853 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 LARSQ9P2J5 1176 aaKnown RBP15.17■□□□□ 0.02
SHMT2-234ENST00000557703 PADI3Q9ULW8 664 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 COLQQ9Y215 455 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-234ENST00000557703 SLC4A7Q9Y6M7 1214 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 TCHHQ07283 1943 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 ARID2Q68CP9 1835 aa15.17■□□□□ 0.02
SHMT2-234ENST00000557703 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-234ENST00000557703 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-234ENST00000557703 ACRP10323 421 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 GHRP10912 638 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 KCNJ6P48051 423 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 SMTNP53814 917 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 SHHQ15465 462 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 FOXD4L6Q3SYB3 417 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-234ENST00000557703 FAM102BQ5T8I3 360 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 SHC4Q6S5L8 630 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 FOXD4L3Q6VB84 417 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-234ENST00000557703 RNF149Q8NC42 400 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 ZBTB10Q96DT7 871 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 PRIMPOLQ96LW4 560 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 OSMRQ99650 979 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 TSPYL2Q9H2G4 693 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-234ENST00000557703 BLOC1S4Q9NUP1 217 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 DACT1Q9NYF0 836 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 ST3GAL5Q9UNP4 418 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 GINS2Q9Y248 185 aa15.16■□□□□ 0.02
SHMT2-234ENST00000557703 A0A087WZ62 844 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 FAM237AA0A1B0GTK4 181 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 GOLGA6L4A6NEF3 574 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 MYL1P05976 194 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 SKIP12755 728 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 ZSCAN20P17040 1043 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-234ENST00000557703 GLRA2P23416 452 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 STAT6P42226 847 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 EPHB4P54760 987 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 SMAD3P84022 425 aaKnown RBP15.15■□□□□ 0.02
SHMT2-234ENST00000557703 TMEM62Q0P6H9 643 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 DMP1Q13316 513 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-234ENST00000557703 DRP2Q13474 957 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 FAM187BQ17R55 369 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 GPR153Q6NV75 609 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 CNNM4Q6P4Q7 775 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 USP49Q70CQ1 688 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 OTOP2Q7RTS6 562 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 KCNK18Q7Z418 384 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 ZBTB8OSQ8IWT0 167 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 SPIRE2Q8WWL2 714 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 FDXACB1Q9BRP7 624 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-234ENST00000557703 POLR3FQ9H1D9 316 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-234ENST00000557703 TNMDQ9H2S6 317 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 AGO3Q9H9G7 860 aaKnown RBP15.15■□□□□ 0.02
SHMT2-234ENST00000557703 ERVK-5Q9HDB9 667 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 SEL1LQ9UBV2 794 aa15.15■□□□□ 0.02
SHMT2-234ENST00000557703 SCN5AQ14524 2016 aa15.14■□□□□ 0.01
SHMT2-234ENST00000557703 AMHP03971 560 aa15.14■□□□□ 0.01
SHMT2-234ENST00000557703 SSBP05455 408 aaKnown RBP eCLIP15.14■□□□□ 0.01
SHMT2-234ENST00000557703 SRGAP2CP0DJJ0 459 aa15.14■□□□□ 0.01
SHMT2-234ENST00000557703 CD52P31358 61 aa15.14■□□□□ 0.01
SHMT2-234ENST00000557703 NAALADL2Q58DX5 795 aa15.14■□□□□ 0.01
SHMT2-234ENST00000557703 SPECC1Q5M775 1068 aa15.14■□□□□ 0.01
SHMT2-234ENST00000557703 CDCA2Q69YH5 1023 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-234ENST00000557703 CLEC17AQ6ZS10 378 aa15.14■□□□□ 0.01
SHMT2-234ENST00000557703 CCDC51Q96ER9 411 aa15.14■□□□□ 0.01
SHMT2-234ENST00000557703 NLRP4Q96MN2 994 aa15.14■□□□□ 0.01
SHMT2-234ENST00000557703 CDHR5Q9HBB8 845 aa15.14■□□□□ 0.01
SHMT2-234ENST00000557703 KBTBD4Q9NVX7 518 aa15.14■□□□□ 0.01
SHMT2-234ENST00000557703 KCNH3Q9ULD8 1083 aa15.14■□□□□ 0.01
SHMT2-234ENST00000557703 NOC2LQ9Y3T9 749 aaKnown RBP15.14■□□□□ 0.01
SHMT2-234ENST00000557703 ENPP3O14638 875 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 HIP1RO75146 1068 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 STAG3L1P0CL83 205 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 MAPTP10636 758 aaKnown RBP15.13■□□□□ 0.01
SHMT2-234ENST00000557703 PLS3P13797 630 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 ZNF131P52739 623 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 WDR5P61964 334 aaKnown RBP15.13■□□□□ 0.01
SHMT2-234ENST00000557703 NFX1Q12986 1120 aaKnown RBP15.13■□□□□ 0.01
SHMT2-234ENST00000557703 CAPSQ13938 189 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 E2F4Q16254 413 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 C9orf50Q5SZB4 431 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 PPP4R3CPQ6ZMV5 832 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 SLC24A5Q71RS6 500 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 FAM228AQ86W67 206 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 GPBP1Q86WP2 473 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 TMEM40Q8WWA1 233 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 PLIN2Q99541 437 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 TMEM134Q9H6X4 195 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 ELAC1Q9H777 363 aaKnown RBP15.13■□□□□ 0.01
SHMT2-234ENST00000557703 PARVGQ9HBI0 331 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 RGS18Q9NS28 235 aa15.13■□□□□ 0.01
SHMT2-234ENST00000557703 PRMT7Q9NVM4 692 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-234ENST00000557703 TTC3P53804 2025 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 TMEM265A0A087WTH1 108 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 A0A087WWV3 80 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 DENND3A2RUS2 1198 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 ZBBXA8MT70 800 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 POLR2DO15514 142 aaKnown RBP15.12■□□□□ 0.01
SHMT2-234ENST00000557703 ERLIN2O94905 339 aa15.12■□□□□ 0.01
SHMT2-234ENST00000557703 SLFN14P0C7P3 912 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms