RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CA3P07451 260 aa13.91□□□□□ -0.18
SLIRP-211ENST00000557623 DARSP14868 501 aaKnown RBP13.91□□□□□ -0.18
SLIRP-211ENST00000557623 MYOGP15173 224 aa13.91□□□□□ -0.18
SLIRP-211ENST00000557623 RESTQ13127 1097 aa13.91□□□□□ -0.18
SLIRP-211ENST00000557623 MXD4Q14582 209 aaPredicted RBP13.91□□□□□ -0.18
SLIRP-211ENST00000557623 FAM228AQ86W67 206 aa13.91□□□□□ -0.18
SLIRP-211ENST00000557623 SNX29Q8TEQ0 813 aa13.91□□□□□ -0.18
SLIRP-211ENST00000557623 C1orf112Q9NSG2 853 aa13.91□□□□□ -0.18
SLIRP-211ENST00000557623 MTMR6Q9Y217 621 aa13.91□□□□□ -0.18
SLIRP-211ENST00000557623 COL4A3BPQ9Y5P4 624 aa13.91□□□□□ -0.18
SLIRP-211ENST00000557623 A0A087WZ62 844 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 DENND3A2RUS2 1198 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 ARHGEF35A5YM69 484 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 VWA3AA6NCI4 1184 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 UPP2O95045 317 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 STAG3L1P0CL83 205 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 SFPQP23246 707 aaKnown RBP eCLIP13.9□□□□□ -0.18
SLIRP-211ENST00000557623 HTRA4P83105 476 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-211ENST00000557623 SF3A1Q15459 793 aaKnown RBP13.9□□□□□ -0.18
SLIRP-211ENST00000557623 IL17AQ16552 155 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 FAM117BQ6P1L5 589 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 POTEGQ6S5H5 508 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 TMCO2Q7Z6W1 182 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-211ENST00000557623 KCTD17Q8N5Z5 321 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 MCPH1Q8NEM0 835 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 TMEM143Q96AN5 459 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 AK8Q96MA6 479 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 NLRP4Q96MN2 994 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 YME1L1Q96TA2 773 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 FDXACB1Q9BRP7 624 aaPredicted RBP13.9□□□□□ -0.18
SLIRP-211ENST00000557623 TMX1Q9H3N1 280 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 COL4A6Q14031 1691 aa13.9□□□□□ -0.18
SLIRP-211ENST00000557623 MYH11P35749 1972 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 SLC26A4O43511 780 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 ZSCAN20P17040 1043 aaPredicted RBP13.89□□□□□ -0.19
SLIRP-211ENST00000557623 LAMTOR4Q0VGL1 99 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 TFDP1Q14186 410 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 LCE2DQ5TA82 110 aaPredicted RBP13.89□□□□□ -0.19
SLIRP-211ENST00000557623 SLC24A5Q71RS6 500 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 SRGAP1Q7Z6B7 1085 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 RTN4RL1Q86UN2 441 aaPredicted RBP13.89□□□□□ -0.19
SLIRP-211ENST00000557623 NPAS4Q8IUM7 802 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 PRPF31Q8WWY3 499 aaKnown RBP13.89□□□□□ -0.19
SLIRP-211ENST00000557623 LINC01599Q8WXQ3 324 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 ZNF668Q96K58 619 aaPredicted RBP13.89□□□□□ -0.19
SLIRP-211ENST00000557623 GUCD1Q96NT3 240 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 ADAM2Q99965 735 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 NT5C3AQ9H0P0 336 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 XPNPEP1Q9NQW7 623 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 RGS18Q9NS28 235 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 DDX19AQ9NUU7 478 aaKnown RBP13.89□□□□□ -0.19
SLIRP-211ENST00000557623 LRFN2Q9ULH4 789 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 KIAA1024Q9UPX6 916 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 DNM3Q9UQ16 869 aa13.89□□□□□ -0.19
SLIRP-211ENST00000557623 FNDC1Q4ZHG4 1894 aaPredicted RBP13.89□□□□□ -0.19
SLIRP-211ENST00000557623 A0A087WWV3 80 aa13.88□□□□□ -0.19
SLIRP-211ENST00000557623 USO1O60763 962 aaKnown RBP13.88□□□□□ -0.19
SLIRP-211ENST00000557623 SRGAP2CP0DJJ0 459 aa13.88□□□□□ -0.19
SLIRP-211ENST00000557623 LONP1P36776 959 aaKnown RBP13.88□□□□□ -0.19
SLIRP-211ENST00000557623 SARSP49591 514 aaKnown RBP13.88□□□□□ -0.19
SLIRP-211ENST00000557623 TAP1Q03518 808 aa13.88□□□□□ -0.19
SLIRP-211ENST00000557623 POU5F1BQ06416 359 aa13.88□□□□□ -0.19
SLIRP-211ENST00000557623 GRIN2CQ14957 1233 aa13.88□□□□□ -0.19
SLIRP-211ENST00000557623 KSR1Q8IVT5 923 aa13.88□□□□□ -0.19
SLIRP-211ENST00000557623 CDK5RAP3Q96JB5 506 aa13.88□□□□□ -0.19
SLIRP-211ENST00000557623 CDX2Q99626 313 aaPredicted RBP13.88□□□□□ -0.19
SLIRP-211ENST00000557623 IFT122Q9HBG6 1241 aa13.88□□□□□ -0.19
SLIRP-211ENST00000557623 CHST12Q9NRB3 414 aa13.88□□□□□ -0.19
SLIRP-211ENST00000557623 DACT1Q9NYF0 836 aa13.88□□□□□ -0.19
SLIRP-211ENST00000557623 STXBP5LQ9Y2K9 1186 aa13.88□□□□□ -0.19
SLIRP-211ENST00000557623 PCDHB7Q9Y5E2 793 aa13.88□□□□□ -0.19
SLIRP-211ENST00000557623 LCHNA4D1U4 455 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 PP2D1A8MPX8 630 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 RBAK-RBAKDNI3L0D1 243 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 EYA4O95677 639 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 CYP11B2P19099 503 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 CDC25AP30304 524 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 ARL2P36404 184 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 PHKA2P46019 1235 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 DSC3Q14574 896 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 PCBP1Q15365 356 aaKnown RBP eCLIP13.87□□□□□ -0.19
SLIRP-211ENST00000557623 ECM1Q16610 540 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 HYIQ5T013 277 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 PADI6Q6TGC4 694 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 CATSPER4Q7RTX7 472 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 RNF149Q8NC42 400 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 SAMD11Q96NU1 681 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 TGS1Q96RS0 853 aaKnown RBP13.87□□□□□ -0.19
SLIRP-211ENST00000557623 GAS2L1Q99501 681 aaPredicted RBP13.87□□□□□ -0.19
SLIRP-211ENST00000557623 MMTAG2Q9BU76 263 aaKnown RBP13.87□□□□□ -0.19
SLIRP-211ENST00000557623 BHMT2Q9H2M3 363 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 TSHZ2Q9NRE2 1034 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 CLIC4Q9Y696 253 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 MYO9BQ13459 2157 aa13.87□□□□□ -0.19
SLIRP-211ENST00000557623 COL4A4P53420 1690 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-211ENST00000557623 KIAA1671Q9BY89 1806 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 LINC01553A4QN01 128 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 C9IYK1 514 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 MGEA5O60502 916 aa13.86□□□□□ -0.19
SLIRP-211ENST00000557623 DGKIO75912 1065 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms