RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 MYH9P35579 1960 aaKnown RBP13.68□□□□□ -0.22
SHMT2-233ENST00000557529 PLXNA1Q9UIW2 1896 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 ARID2Q68CP9 1835 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 TTC26A0AVF1 554 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 DENND3A2RUS2 1198 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 KIF3CO14782 793 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 NKRFO15226 690 aaKnown RBP eCLIP13.68□□□□□ -0.22
SHMT2-233ENST00000557529 MAFO75444 373 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-233ENST00000557529 HOXC6P09630 235 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 KRT9P35527 623 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 TM4SF4P48230 202 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 IQSEC1Q6DN90 963 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 TMTC1Q8IUR5 882 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 MAP4K3Q8IVH8 894 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 FAM186BQ8IYM0 893 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 CCAR2Q8N163 923 aaKnown RBP13.68□□□□□ -0.22
SHMT2-233ENST00000557529 OR8K1Q8NGG5 319 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 BSNDQ8WZ55 320 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 COPS5Q92905 334 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 CEP89Q96ST8 783 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 JPH2Q9BR39 696 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-233ENST00000557529 TTYH3Q9C0H2 523 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 ABHD10Q9NUJ1 306 aa13.68□□□□□ -0.22
SHMT2-233ENST00000557529 MAPK13O15264 365 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 HBP1O60381 514 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 EXOC3O60645 756 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 AFPP02771 609 aaKnown RBP13.67□□□□□ -0.22
SHMT2-233ENST00000557529 ARL2P36404 184 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 NAMPTP43490 491 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 ZBED6P86452 979 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 KCNH2Q12809 1159 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 ACVR2BQ13705 512 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 PLCB4Q15147 1175 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-233ENST00000557529 NEK11Q8NG66 645 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 PPTC7Q8NI37 304 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 NPLOC4Q8TAT6 608 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 SOCS4Q8WXH5 440 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 DNAJC7Q99615 494 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 MMRN2Q9H8L6 949 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 ERAP1Q9NZ08 941 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 MCM3APO60318 1980 aa13.67□□□□□ -0.22
SHMT2-233ENST00000557529 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 OFD1O75665 1012 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 RGS2P41220 211 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 ADCYAP1R1P41586 468 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 CASP4P49662 377 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 CYP2J2P51589 502 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 SOX10P56693 466 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 DUSP28Q4G0W2 176 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 IER5Q5VY09 327 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 E4F1Q66K89 784 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-233ENST00000557529 CYP26C1Q6V0L0 522 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 DEPTORQ8TB45 409 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 TCP11Q8WWU5 503 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 TMEM143Q96AN5 459 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 BORCS6Q96GS4 357 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 ZNHIT6Q9NWK9 470 aaKnown RBP13.66□□□□□ -0.22
SHMT2-233ENST00000557529 ARHGAP28Q9P2N2 729 aa13.66□□□□□ -0.22
SHMT2-233ENST00000557529 ZHX1Q9UKY1 873 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-233ENST00000557529 GTPBP10A4D1E9 387 aaKnown RBP13.65□□□□□ -0.22
SHMT2-233ENST00000557529 RASSF10A6NK89 507 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 RNF225M0QZC1 329 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-233ENST00000557529 CA12O43570 354 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 PPFIA4O75335 1185 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 ALDH1A1P00352 501 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 KRT13P13646 458 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 MARK3P27448 753 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 KLK7P49862 253 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 HSP90AA2PQ14568 343 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-233ENST00000557529 BRDTQ58F21 947 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-233ENST00000557529 DCAF17Q5H9S7 520 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-233ENST00000557529 TCERG1LQ5VWI1 586 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 OLFML2BQ68BL8 750 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 INTS8Q75QN2 995 aaKnown RBP13.65□□□□□ -0.22
SHMT2-233ENST00000557529 TRIM50Q86XT4 487 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 XXYLT1Q8NBI6 393 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 USP6NLQ92738 828 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 SLC35C1Q96A29 364 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 KIFC3Q9BVG8 833 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 IKZF4Q9H2S9 585 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 TRPC6Q9Y210 931 aa13.65□□□□□ -0.22
SHMT2-233ENST00000557529 PHLPP2Q6ZVD8 1323 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 IGKV6-21A0A0C4DH24 114 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 GOLGA6L9A6NEM1 432 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 KIF2AO00139 706 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-233ENST00000557529 TOMM70O94826 608 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 LGALS2P05162 132 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 SMPD1P17405 629 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 GLRA2P23416 452 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 CDK17Q00537 523 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 KCNMA1Q12791 1236 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 STRN3Q13033 797 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 CRHR2Q13324 411 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 MXD4Q14582 209 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-233ENST00000557529 ZNF484Q5JVG2 852 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 DNTTIP2Q5QJE6 756 aaKnown RBP13.64□□□□□ -0.23
SHMT2-233ENST00000557529 TMEM63BQ5T3F8 832 aa13.64□□□□□ -0.23
SHMT2-233ENST00000557529 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-233ENST00000557529 ASAP3Q8TDY4 903 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms