RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 COPS2P61201 443 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 SPIRE1Q08AE8 756 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 NCBP1Q09161 790 aaKnown RBP9.28□□□□□ -0.92
PSEN1-223ENST00000557511 MGAT3Q09327 533 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 LPIN1Q14693 890 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 TARBP2Q15633 366 aaKnown RBP9.28□□□□□ -0.92
PSEN1-223ENST00000557511 KIZQ2M2Z5 673 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 ARL6IP4Q66PJ3 421 aaKnown RBP9.28□□□□□ -0.92
PSEN1-223ENST00000557511 PLA2G4FQ68DD2 849 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 ANO5Q75V66 913 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 FERMT3Q86UX7 667 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 HERC6Q8IVU3 1022 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 SNX29Q8TEQ0 813 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 PSPC1Q8WXF1 523 aaKnown RBP9.28□□□□□ -0.92
PSEN1-223ENST00000557511 PPP1R16BQ96T49 567 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 MTRQ99707 1265 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 POLR3CQ9BUI4 534 aaPredicted RBP9.28□□□□□ -0.92
PSEN1-223ENST00000557511 ATP6V0A4Q9HBG4 840 aa9.28□□□□□ -0.92
PSEN1-223ENST00000557511 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
PSEN1-223ENST00000557511 GRXCR1A8MXD5 290 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 ZBTB42B2RXF5 422 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 WNT7AO00755 349 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 DGAT1O75907 488 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 UPP2O95045 317 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 SFPQP23246 707 aaKnown RBP eCLIP9.27□□□□□ -0.93
PSEN1-223ENST00000557511 RPA1P27694 616 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 CD52P31358 61 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 NPEPPSP55786 919 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 ATP2C1P98194 919 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-223ENST00000557511 TFDP1Q14186 410 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 MXD4Q14582 209 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-223ENST00000557511 MBTPS1Q14703 1052 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 EMC2Q15006 297 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 ZRSR1Q15695 479 aaKnown RBP9.27□□□□□ -0.93
PSEN1-223ENST00000557511 PPP2R2DQ66LE6 453 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 FAM117BQ6P1L5 589 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 ZNF410Q86VK4 478 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 RHPN2Q8IUC4 686 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 MCPH1Q8NEM0 835 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 CALML4Q96GE6 196 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 ZNF396Q96N95 335 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-223ENST00000557511 YME1L1Q96TA2 773 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 RAD9AQ99638 391 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 OSMRQ99650 979 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 HSD17B14Q9BPX1 270 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 SH2D3AQ9BRG2 576 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 PBX4Q9BYU1 374 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 NT5C3AQ9H0P0 336 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 NKX2-4Q9H2Z4 354 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 IL21Q9HBE4 155 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 PADI3Q9ULW8 664 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 DNM3Q9UQ16 869 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 INSL6Q9Y581 213 aa9.27□□□□□ -0.93
PSEN1-223ENST00000557511 KAT6AQ92794 2004 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 TMEM150BA6NC51 233 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 VWA3AA6NCI4 1184 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 ACTN4O43707 911 aaKnown RBP9.26□□□□□ -0.93
PSEN1-223ENST00000557511 USO1O60763 962 aaKnown RBP9.26□□□□□ -0.93
PSEN1-223ENST00000557511 IBSPP21815 317 aaPredicted RBP9.26□□□□□ -0.93
PSEN1-223ENST00000557511 EIF4BP23588 611 aaKnown RBP9.26□□□□□ -0.93
PSEN1-223ENST00000557511 TXLNAP40222 546 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 UBA7P41226 1012 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 TOB1P50616 345 aaPredicted RBP9.26□□□□□ -0.93
PSEN1-223ENST00000557511 GPC3P51654 580 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 RABGGTBP53611 331 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 GPNMBQ14956 572 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 CATSPER3Q86XQ3 398 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 KCTD17Q8N5Z5 321 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 PIGOQ8TEQ8 1089 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 NLRP4Q96MN2 994 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 FAM161BQ96MY7 647 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 GAS2L1Q99501 681 aaPredicted RBP9.26□□□□□ -0.93
PSEN1-223ENST00000557511 ZNF576Q9H609 170 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 SLC24A3Q9HC58 644 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 C1orf112Q9NSG2 853 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 DBR1Q9UK59 544 aaKnown RBP9.26□□□□□ -0.93
PSEN1-223ENST00000557511 ST3GAL5Q9UNP4 418 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 KIAA1024Q9UPX6 916 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 NOC2LQ9Y3T9 749 aaKnown RBP9.26□□□□□ -0.93
PSEN1-223ENST00000557511 COL4A3BPQ9Y5P4 624 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 TRIOBPQ9H2D6 2365 aa9.26□□□□□ -0.93
PSEN1-223ENST00000557511 TANC1Q9C0D5 1861 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 DNAH12Q6ZR08 3092 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 A0A087WZ62 844 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 IGKV6-21A0A0C4DH24 114 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 SLC26A4O43511 780 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 GPR32O75388 356 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 MED24O75448 989 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 ERLIN2O94905 339 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 STBD1O95210 358 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 GJB5O95377 273 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 SKIP12755 728 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 DARSP14868 501 aaKnown RBP9.25□□□□□ -0.93
PSEN1-223ENST00000557511 LONP1P36776 959 aaKnown RBP9.25□□□□□ -0.93
PSEN1-223ENST00000557511 PHKA2P46019 1235 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 RARRES1P49788 294 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 DEFB103AP81534 67 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 SF3A1Q15459 793 aaKnown RBP9.25□□□□□ -0.93
PSEN1-223ENST00000557511 TJAP1Q5JTD0 557 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 FAM102BQ5T8I3 360 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms