RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 SYNGAP1Q96PV0 1343 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 ANKRD62A6NC57 917 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 AGTP01019 485 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 HLA-DOAP06340 250 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 CHRNA3P32297 505 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 CIITAP33076 1130 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 MMP13P45452 471 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 PMS2P54278 862 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 ADCY2Q08462 1091 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 PPP2R5AQ15172 486 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 QRICH1Q2TAL8 776 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 C6orf118Q5T5N4 469 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 FAM186BQ8IYM0 893 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 NLGN2Q8NFZ4 835 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 GIMAP7Q8NHV1 300 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 MORC4Q8TE76 937 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 DPH5Q9H2P9 285 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 SEL1LQ9UBV2 794 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 ATP8A1Q9Y2Q0 1164 aa17.64■□□□□ 0.41
SHMT2-232ENST00000557487 DNM1LO00429 736 aa17.63■□□□□ 0.41
SHMT2-232ENST00000557487 BBOX1O75936 387 aa17.63■□□□□ 0.41
SHMT2-232ENST00000557487 GCNT3O95395 438 aa17.63■□□□□ 0.41
SHMT2-232ENST00000557487 STAT3P40763 770 aa17.63■□□□□ 0.41
SHMT2-232ENST00000557487 EIF6P56537 245 aaKnown RBP17.63■□□□□ 0.41
SHMT2-232ENST00000557487 CRY2Q49AN0 593 aa17.63■□□□□ 0.41
SHMT2-232ENST00000557487 KIAA1755Q5JYT7 1200 aa17.63■□□□□ 0.41
SHMT2-232ENST00000557487 C11orf63Q6NUN7 778 aa17.63■□□□□ 0.41
SHMT2-232ENST00000557487 MKL1Q969V6 931 aa17.63■□□□□ 0.41
SHMT2-232ENST00000557487 HVCN1Q96D96 273 aa17.63■□□□□ 0.41
SHMT2-232ENST00000557487 CELF4Q9BZC1 486 aaKnown RBP17.63■□□□□ 0.41
SHMT2-232ENST00000557487 MTRF1LQ9UGC7 380 aaKnown RBP17.63■□□□□ 0.41
SHMT2-232ENST00000557487 FRMPD4Q14CM0 1322 aa17.63■□□□□ 0.41
SHMT2-232ENST00000557487 CCT8L1PA6NM43 557 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 USP17L15C9J2P7 530 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 USP17L13C9JLJ4 530 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 USP17L11C9JVI0 530 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 USP17L18D6R9N7 530 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 USP17L22D6RA61 530 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 USP17L17D6RBQ6 530 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 USP17L19D6RCP7 530 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 USP17L20D6RJB6 530 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 CTNND1O60716 968 aaKnown RBP17.62■□□□□ 0.41
SHMT2-232ENST00000557487 SHMT1P34896 483 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 SREBF1P36956 1147 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 KLRC3Q07444 240 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 USP17L24Q0WX57 530 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 MAPK7Q13164 816 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 USP17L6PQ6QN14 398 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 OLIG1Q8TAK6 271 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 RBM17Q96I25 401 aaKnown RBP17.62■□□□□ 0.41
SHMT2-232ENST00000557487 ZNF317Q96PQ6 595 aaPredicted RBP17.62■□□□□ 0.41
SHMT2-232ENST00000557487 NSRP1Q9H0G5 558 aaKnown RBP17.62■□□□□ 0.41
SHMT2-232ENST00000557487 MCM8Q9UJA3 840 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 PHF2O75151 1096 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 EZRP15311 586 aaKnown RBP17.62■□□□□ 0.41
SHMT2-232ENST00000557487 MUTP22033 750 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 SLC16A2P36021 539 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 FMO5P49326 533 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 MMP14P50281 582 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 SLMAPQ14BN4 828 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 PRR16Q569H4 304 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 UBL4BQ8N7F7 174 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 PCYOX1Q9UHG3 505 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 DNAJC12Q9UKB3 198 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 AJAP1Q9UKB5 411 aaPredicted RBP17.62■□□□□ 0.41
SHMT2-232ENST00000557487 RABGAP1Q9Y3P9 1069 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 SRCAPQ6ZRS2 3230 aa17.62■□□□□ 0.41
SHMT2-232ENST00000557487 MEIS2O14770 477 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 KIF1CO43896 1103 aaKnown RBP17.61■□□□□ 0.41
SHMT2-232ENST00000557487 MGRN1O60291 552 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 TNFAIP3P21580 790 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 CASP4P49662 377 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 PSMC6P62333 389 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 PICALMQ13492 652 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 MYBPC2Q14324 1141 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 KIF22Q14807 665 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 DRAP1Q14919 205 aaPredicted RBP17.61■□□□□ 0.41
SHMT2-232ENST00000557487 KCTD1Q719H9 257 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 PIGWQ7Z7B1 504 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 JAMLQ86YT9 394 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 GLYCTKQ8IVS8 523 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 GPATCH11Q8N954 259 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 GPR101Q96P66 508 aaPredicted RBP17.61■□□□□ 0.41
SHMT2-232ENST00000557487 TRIM51Q9BSJ1 452 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 TAOK3Q9H2K8 898 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 CD248Q9HCU0 757 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 TUFT1Q9NNX1 390 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 NYAP2Q9P242 653 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 PPP1R9AQ9ULJ8 1098 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 PCDHB13Q9Y5F0 798 aa17.61■□□□□ 0.41
SHMT2-232ENST00000557487 CFAP73A6NFT4 308 aa17.6■□□□□ 0.41
SHMT2-232ENST00000557487 SPDYE3A6NKU9 549 aa17.6■□□□□ 0.41
SHMT2-232ENST00000557487 F8W031 263 aaPredicted RBP17.6■□□□□ 0.41
SHMT2-232ENST00000557487 KIAA0391O15091 583 aaKnown RBP17.6■□□□□ 0.41
SHMT2-232ENST00000557487 RGS16O15492 202 aaPredicted RBP17.6■□□□□ 0.41
SHMT2-232ENST00000557487 TGFB1I1O43294 461 aa17.6■□□□□ 0.41
SHMT2-232ENST00000557487 PPIP5K2O43314 1243 aa17.6■□□□□ 0.41
SHMT2-232ENST00000557487 CAND2O75155 1236 aa17.6■□□□□ 0.41
SHMT2-232ENST00000557487 MMEP08473 750 aa17.6■□□□□ 0.41
SHMT2-232ENST00000557487 NF2P35240 595 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms