RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 KAT5Q92993 513 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 STK33Q9BYT3 514 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 VEZTQ9HBM0 779 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 ERVK-5Q9HDB9 667 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 FBXL5Q9UKA1 691 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 FRMD4BQ9Y2L6 1034 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 FAM169AQ9Y6X4 670 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 ZNF646O15015 1829 aaPredicted RBP19.24■□□□□ 0.67
XRCC3-218ENST00000557439 EBAG9O00559 213 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 NDUFAB1O14561 156 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 PPIP5K2O43314 1243 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 MAPK7Q13164 816 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 MCTP2Q6DN12 878 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 HES6Q96HZ4 224 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 TMEM39BQ9GZU3 492 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 ARHGEF10LQ9HCE6 1279 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 SUCLA2Q9P2R7 463 aaPredicted RBP19.24■□□□□ 0.67
XRCC3-218ENST00000557439 AMFRQ9UKV5 643 aa19.24■□□□□ 0.67
XRCC3-218ENST00000557439 TMEM110-MUSTN1A8MSY1 372 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 IPO5O00410 1097 aaKnown RBP19.23■□□□□ 0.67
XRCC3-218ENST00000557439 PPP1R12BO60237 982 aaPredicted RBP19.23■□□□□ 0.67
XRCC3-218ENST00000557439 ENTPD3O75355 529 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 MAGEA9P43362 315 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 ARHGEF19Q8IW93 802 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 ATP6V1G3Q96LB4 118 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 COL20A1Q9P218 1284 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 TMX2Q9Y320 296 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 GTPBP10A4D1E9 387 aaKnown RBP19.23■□□□□ 0.67
XRCC3-218ENST00000557439 ARHGEF35A5YM69 484 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 K7ENM7 598 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 BACH1O14867 736 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 ITGB5P18084 799 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 LSP1P33241 339 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 LDHDQ86WU2 507 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 CPNE8Q86YQ8 564 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 CBWD1Q9BRT8 395 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 WDR11Q9BZH6 1224 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 TSPYL1Q9H0U9 437 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 APEX2Q9UBZ4 518 aa19.23■□□□□ 0.67
XRCC3-218ENST00000557439 C21orf2O43822 256 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 CTNNA1P35221 906 aaKnown RBP19.22■□□□□ 0.67
XRCC3-218ENST00000557439 USP8P40818 1118 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 GCLMP48507 274 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 MARCKSL1P49006 195 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 BBXQ8WY36 941 aaPredicted RBP19.22■□□□□ 0.67
XRCC3-218ENST00000557439 ALG3Q92685 438 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 GLG1Q92896 1179 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 NACC1Q96RE7 527 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 SYT11Q9BT88 431 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 DMAC2Q9NW81 257 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 EMSYQ7Z589 1322 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 DCDC2CA8MYV0 355 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 H0YGN5 161 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 CES2O00748 559 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 DDX3YO15523 660 aaKnown RBP19.22■□□□□ 0.67
XRCC3-218ENST00000557439 ATMINO43313 823 aaPredicted RBP19.22■□□□□ 0.67
XRCC3-218ENST00000557439 VIL1P09327 827 aaKnown RBP19.22■□□□□ 0.67
XRCC3-218ENST00000557439 TNFAIP3P21580 790 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 ZNF131P52739 623 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 PPP3CAQ08209 521 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 BFSP1Q12934 665 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 LLGL1Q15334 1064 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 SLC15A2Q16348 729 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 KDM7AQ6ZMT4 941 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 CTNNBL1Q8WYA6 563 aaPredicted RBP19.22■□□□□ 0.67
XRCC3-218ENST00000557439 UBE2TQ9NPD8 197 aaPredicted RBP19.22■□□□□ 0.67
XRCC3-218ENST00000557439 HOMER2Q9NSB8 354 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 NFS1Q9Y697 457 aa19.22■□□□□ 0.67
XRCC3-218ENST00000557439 ZNF844Q08AG5 666 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 PADI6Q6TGC4 694 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 MICALL1Q8N3F8 863 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 RASGEF1CQ8N431 466 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 RFFLQ8WZ73 363 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 GPRC5CQ9NQ84 441 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 STK24Q9Y6E0 443 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 GOLGA8IPA6NC78 632 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 GOLGA8JA6NMD2 632 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 NFIBO00712 420 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 ITGB3BPQ13352 177 aaPredicted RBP19.21■□□□□ 0.67
XRCC3-218ENST00000557439 MKRN4PQ13434 485 aaPredicted RBP19.21■□□□□ 0.67
XRCC3-218ENST00000557439 LMO3Q8TAP4 145 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 LMBR1Q8WVP7 490 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 FAM84AQ96KN4 292 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 TEKT3Q9BXF9 490 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 RANBP17Q9H2T7 1088 aaKnown RBP19.21■□□□□ 0.67
XRCC3-218ENST00000557439 TMBIM4Q9HC24 238 aa19.21■□□□□ 0.67
XRCC3-218ENST00000557439 A0A0A6YYK5 440 aaPredicted RBP19.2■□□□□ 0.66
XRCC3-218ENST00000557439 MYO1FO00160 1098 aa19.2■□□□□ 0.66
XRCC3-218ENST00000557439 NPM3O75607 178 aaKnown RBP19.2■□□□□ 0.66
XRCC3-218ENST00000557439 LMNB1P20700 586 aa19.2■□□□□ 0.66
XRCC3-218ENST00000557439 TMOD1P28289 359 aa19.2■□□□□ 0.66
XRCC3-218ENST00000557439 PPATQ06203 517 aa19.2■□□□□ 0.66
XRCC3-218ENST00000557439 PLEKHO2Q8TD55 490 aa19.2■□□□□ 0.66
XRCC3-218ENST00000557439 GOPCQ9HD26 462 aa19.2■□□□□ 0.66
XRCC3-218ENST00000557439 TMEM253P0C7T8 217 aa19.2■□□□□ 0.66
XRCC3-218ENST00000557439 FKBP1AP62942 108 aaKnown RBP19.2■□□□□ 0.66
XRCC3-218ENST00000557439 CD302Q8IX05 232 aa19.2■□□□□ 0.66
XRCC3-218ENST00000557439 CPXCR1Q8N123 301 aa19.2■□□□□ 0.66
XRCC3-218ENST00000557439 KRT35Q92764 455 aa19.2■□□□□ 0.66
XRCC3-218ENST00000557439 CALR3Q96L12 384 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms