RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 AP3B2Q13367 1082 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 BMS1Q14692 1282 aaKnown RBP11.44□□□□□ -0.58
APEX1-218ENST00000557344 OTOP3Q7RTS5 596 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 ECHDC2Q86YB7 292 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 ABI1Q8IZP0 508 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 FEZF2Q8TBJ5 459 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 SLC22A17Q8WUG5 538 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 ACSF2Q96CM8 615 aaPredicted RBP11.44□□□□□ -0.58
APEX1-218ENST00000557344 ZNF274Q96GC6 653 aaPredicted RBP11.44□□□□□ -0.58
APEX1-218ENST00000557344 CNTNAP3BQ96NU0 1288 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 PPP1R16BQ96T49 567 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 OSMRQ99650 979 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 MXRA8Q9BRK3 442 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 SDF4Q9BRK5 362 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 LARP6Q9BRS8 491 aaKnown RBP11.44□□□□□ -0.58
APEX1-218ENST00000557344 RNF26Q9BY78 433 aaPredicted RBP11.44□□□□□ -0.58
APEX1-218ENST00000557344 CNTNAP3Q9BZ76 1288 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 GLT8D2Q9H1C3 349 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 KCNK12Q9HB15 430 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 FBXL21Q9UKT6 434 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 IRAK3Q9Y616 596 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 R4GN57 208 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 EPG5Q9HCE0 2579 aa11.44□□□□□ -0.58
APEX1-218ENST00000557344 TPRP12270 2363 aaKnown RBP11.43□□□□□ -0.58
APEX1-218ENST00000557344 COL1A2P08123 1366 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 ZBTB42B2RXF5 422 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 MEIS1O00470 390 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 CA8P35219 290 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 ITGB3BPQ13352 177 aaPredicted RBP11.43□□□□□ -0.58
APEX1-218ENST00000557344 CEP55Q53EZ4 464 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 ZNF484Q5JVG2 852 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 CLLU1OSQ5K130 101 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 JAKMIP3Q5VZ66 844 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 TMC5Q6UXY8 1006 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 GPR149Q86SP6 731 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 VPS52Q8N1B4 723 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 ZBP1Q9H171 429 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 OTOGLQ3ZCN5 2332 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 CEP250Q9BV73 2442 aa11.43□□□□□ -0.58
APEX1-218ENST00000557344 WDR87Q6ZQQ6 2873 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 MYH9P35579 1960 aaKnown RBP11.42□□□□□ -0.58
APEX1-218ENST00000557344 IGLV3-22A0A075B6J6 115 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.42□□□□□ -0.58
APEX1-218ENST00000557344 KRBA1A5PL33 1030 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 NT5C1B-RDH14C9J2C7 533 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 FAM86B1E9PN63 330 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 C22orf31O95567 290 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 CCNE2O96020 404 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 VTNP04004 478 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 CYP3A4P08684 503 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 FAM86B2P0C5J1 330 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 ALDH7A1P49419 539 aaKnown RBP11.42□□□□□ -0.58
APEX1-218ENST00000557344 BCAR1P56945 870 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 ANAPC15P60006 121 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 GIT2Q14161 759 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 ABHD15Q6UXT9 468 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 CCDC149Q6ZUS6 474 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 CABP7Q86V35 215 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 TMEM87AQ8NBN3 555 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 AUTS2Q8WXX7 1259 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 RUBCNQ92622 972 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 TMEM169Q96HH4 297 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 SLC26A6Q9BXS9 759 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 AGO4Q9HCK5 861 aaKnown RBP11.42□□□□□ -0.58
APEX1-218ENST00000557344 C6orf50Q9HD87 102 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 PDRG1Q9NUG6 133 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 IGSF9Q9P2J2 1179 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 WNT16Q9UBV4 365 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 DNAH14Q0VDD8 3507 aa11.42□□□□□ -0.58
APEX1-218ENST00000557344 DENND4AQ7Z401 1863 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 STK25O00506 426 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 BACH1O14867 736 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 NARSO43776 548 aaKnown RBP11.41□□□□□ -0.58
APEX1-218ENST00000557344 EDIL3O43854 480 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 SEC24BO95487 1268 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 CTSAP10619 480 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 ZSCAN20P17040 1043 aaPredicted RBP11.41□□□□□ -0.58
APEX1-218ENST00000557344 ATP4AP20648 1035 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 GNA11P29992 359 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 POLGP54098 1239 aaPredicted RBP11.41□□□□□ -0.58
APEX1-218ENST00000557344 FAM160B1Q5W0V3 765 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 PDXDC2PQ6P474 469 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 NIPA1Q7RTP0 329 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 ZNF598Q86UK7 904 aaKnown RBP11.41□□□□□ -0.58
APEX1-218ENST00000557344 CCDC60Q8IWA6 550 aaPredicted RBP11.41□□□□□ -0.58
APEX1-218ENST00000557344 REXO1Q8N1G1 1221 aaKnown RBP11.41□□□□□ -0.58
APEX1-218ENST00000557344 RNF169Q8NCN4 708 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 CCDC12Q8WUD4 166 aaPredicted RBP11.41□□□□□ -0.58
APEX1-218ENST00000557344 RIN2Q8WYP3 895 aaPredicted RBP11.41□□□□□ -0.58
APEX1-218ENST00000557344 HINFPQ9BQA5 517 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 SFXN1Q9H9B4 322 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 SH3GLB2Q9NR46 395 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 VPS54Q9P1Q0 977 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 EVPLQ92817 2033 aa11.41□□□□□ -0.58
APEX1-218ENST00000557344 KMT2BQ9UMN6 2715 aaPredicted RBP11.4□□□□□ -0.58
APEX1-218ENST00000557344 A0A0U1RQF3 1178 aa11.4□□□□□ -0.58
APEX1-218ENST00000557344 DHX15O43143 795 aaKnown RBP11.4□□□□□ -0.58
APEX1-218ENST00000557344 CFHP08603 1231 aa11.4□□□□□ -0.58
APEX1-218ENST00000557344 SP9P0CG40 484 aa11.4□□□□□ -0.58
APEX1-218ENST00000557344 EIF4BP23588 611 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms