RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 CAND2O75155 1236 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 PEX3P56589 373 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 CNNM4Q6P4Q7 775 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 CCDC155Q8N6L0 562 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 RNF149Q8NC42 400 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 KIFAP3Q92845 792 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 HPS3Q969F9 1004 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 DRC1Q96MC2 740 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 TIGD1Q96MW7 591 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 TIPINQ9BVW5 301 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 ZHX3Q9H4I2 956 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 MINDY3Q9H8M7 445 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 IFT122Q9HBG6 1241 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 ODF2LQ9ULJ1 636 aa14.19□□□□□ -0.14
SHMT2-227ENST00000557269 FRMD3A2A2Y4 597 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 ASAP2O43150 1006 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 GTPBP6O43824 516 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-227ENST00000557269 KLRC4O43908 158 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 FAM13AO94988 1023 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 PLS3P13797 630 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 IDEP14735 1019 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 RAG1P15918 1043 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 FGFR4P22455 802 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 NPTX2P47972 431 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 CRYBB1P53674 252 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-227ENST00000557269 ASIC1P78348 528 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 AMPD3Q01432 767 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 DPYDQ12882 1025 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 PNOCQ13519 176 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 MXD4Q14582 209 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-227ENST00000557269 LPIN1Q14693 890 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 TCTN1Q2MV58 587 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 FBXO47Q5MNV8 452 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 SFR1Q86XK3 245 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 MYCT1Q8N699 235 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 NLRP7Q8WX94 980 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 BADQ92934 168 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 FIZ1Q96SL8 496 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 FGFBP2Q9BYJ0 223 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 AGO3Q9H9G7 860 aaKnown RBP14.18□□□□□ -0.14
SHMT2-227ENST00000557269 PANK4Q9NVE7 773 aa14.18□□□□□ -0.14
SHMT2-227ENST00000557269 NOC2LQ9Y3T9 749 aaKnown RBP14.18□□□□□ -0.14
SHMT2-227ENST00000557269 LRRIQ4A6NIV6 560 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 CCDC169A6NNP5 214 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 M0QZ92 97 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 SLC16A4O15374 487 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 KINO60870 393 aaKnown RBP14.17□□□□□ -0.14
SHMT2-227ENST00000557269 TBCAO75347 108 aaKnown RBP14.17□□□□□ -0.14
SHMT2-227ENST00000557269 RPLP2P05387 115 aaKnown RBP14.17□□□□□ -0.14
SHMT2-227ENST00000557269 GHRP10912 638 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 DARSP14868 501 aaKnown RBP14.17□□□□□ -0.14
SHMT2-227ENST00000557269 CSF2RAP15509 400 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 NAMPTP43490 491 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 PTENP60484 403 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 POSTNQ15063 836 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 CAMK4Q16566 473 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 MFSD5Q6N075 450 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 ZNF410Q86VK4 478 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 NTPCRQ9BSD7 190 aaKnown RBP14.17□□□□□ -0.14
SHMT2-227ENST00000557269 LRRC27Q9C0I9 530 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 PARVGQ9HBI0 331 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 TBC1D7Q9P0N9 293 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 PRKAG2Q9UGJ0 569 aa14.17□□□□□ -0.14
SHMT2-227ENST00000557269 LTBP2Q14767 1821 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 SCN5AQ14524 2016 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 EDN1P05305 212 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 EIF4BP23588 611 aaKnown RBP14.16□□□□□ -0.14
SHMT2-227ENST00000557269 NMT1P30419 496 aaKnown RBP14.16□□□□□ -0.14
SHMT2-227ENST00000557269 EPHB4P54760 987 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 MBTD1Q05BQ5 628 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 POU5F1BQ06416 359 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 EHHADHQ08426 723 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 COASYQ13057 564 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 DMP1Q13316 513 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-227ENST00000557269 TFDP1Q14186 410 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 KMT5BQ4FZB7 885 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 ODR4Q5SWX8 454 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 CDCA2Q69YH5 1023 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-227ENST00000557269 KANK3Q6NY19 840 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 UNC13DQ70J99 1090 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 DEFB128Q7Z7B8 93 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 GLIS3Q8NEA6 775 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 SPIRE2Q8WWL2 714 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 IFT74Q96LB3 600 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 SCLT1Q96NL6 688 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 GCOM2Q9BZD3 368 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-227ENST00000557269 C17orf75Q9HAS0 396 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 USP20Q9Y2K6 914 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 TANC1Q9C0D5 1861 aa14.16□□□□□ -0.14
SHMT2-227ENST00000557269 PVALEFA0A1B0GWK0 134 aa14.15□□□□□ -0.14
SHMT2-227ENST00000557269 TTLL13PA6NNM8 815 aa14.15□□□□□ -0.14
SHMT2-227ENST00000557269 H0YGN5 161 aa14.15□□□□□ -0.14
SHMT2-227ENST00000557269 TRAK2O60296 914 aa14.15□□□□□ -0.14
SHMT2-227ENST00000557269 RPN1P04843 607 aaKnown RBP14.15□□□□□ -0.14
SHMT2-227ENST00000557269 ACRP10323 421 aa14.15□□□□□ -0.14
SHMT2-227ENST00000557269 CD52P31358 61 aa14.15□□□□□ -0.14
SHMT2-227ENST00000557269 PHKA2P46019 1235 aa14.15□□□□□ -0.14
SHMT2-227ENST00000557269 CASP5P51878 434 aa14.15□□□□□ -0.14
SHMT2-227ENST00000557269 CDC42EP1Q00587 391 aa14.15□□□□□ -0.14
SHMT2-227ENST00000557269 PPP2R5AQ15172 486 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms