RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 PCDHA4Q9UN74 947 aa16.24■□□□□ 0.19
VRTN-202ENST00000557177 TMEM150BA6NC51 233 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 CSDE1O75534 798 aaKnown RBP16.23■□□□□ 0.19
VRTN-202ENST00000557177 REC8O95072 547 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 TDP2O95551 362 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 HOXB8P17481 243 aaPredicted RBP16.23■□□□□ 0.19
VRTN-202ENST00000557177 CDC42EP1Q00587 391 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 SIGLEC14Q08ET2 396 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 XKR3Q5GH77 459 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 LLGL2Q6P1M3 1020 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 RUFY3Q7L099 469 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 MIER3Q7Z3K6 550 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 TMC7Q7Z402 723 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 TRIM22Q8IYM9 498 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 DAGLBQ8NCG7 672 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 MRPL9Q9BYD2 267 aaKnown RBP16.23■□□□□ 0.19
VRTN-202ENST00000557177 GCOM2Q9BZD3 368 aaPredicted RBP16.23■□□□□ 0.19
VRTN-202ENST00000557177 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 CHST12Q9NRB3 414 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 SEPT9Q9UHD8 586 aaPredicted RBP16.23■□□□□ 0.19
VRTN-202ENST00000557177 MYO15AQ9UKN7 3530 aa16.23■□□□□ 0.19
VRTN-202ENST00000557177 ZDBF2Q9HCK1 2354 aa16.22■□□□□ 0.19
VRTN-202ENST00000557177 C2orf71A6NGG8 1288 aa16.22■□□□□ 0.19
VRTN-202ENST00000557177 PHKA2P46019 1235 aa16.22■□□□□ 0.19
VRTN-202ENST00000557177 SSRP1Q08945 709 aaKnown RBP16.22■□□□□ 0.19
VRTN-202ENST00000557177 SMC1AQ14683 1233 aaKnown RBP16.22■□□□□ 0.19
VRTN-202ENST00000557177 MTERF2Q49AM1 385 aa16.22■□□□□ 0.19
VRTN-202ENST00000557177 IER5LQ5T953 404 aa16.22■□□□□ 0.19
VRTN-202ENST00000557177 MOXD1Q6UVY6 613 aa16.22■□□□□ 0.19
VRTN-202ENST00000557177 BLIDQ8IZY5 108 aa16.22■□□□□ 0.19
VRTN-202ENST00000557177 FAM177A1Q8N128 213 aaPredicted RBP16.22■□□□□ 0.19
VRTN-202ENST00000557177 MRPL43Q8N983 215 aaKnown RBP16.22■□□□□ 0.19
VRTN-202ENST00000557177 PRSS33Q8NF86 280 aa16.22■□□□□ 0.19
VRTN-202ENST00000557177 RSPH1Q8WYR4 309 aa16.22■□□□□ 0.19
VRTN-202ENST00000557177 ASIC4Q96FT7 647 aa16.22■□□□□ 0.19
VRTN-202ENST00000557177 HCFC2Q9Y5Z7 792 aa16.22■□□□□ 0.19
VRTN-202ENST00000557177 A0A087WZ62 844 aa16.21■□□□□ 0.19
VRTN-202ENST00000557177 EPB41L2O43491 1005 aaKnown RBP16.21■□□□□ 0.19
VRTN-202ENST00000557177 DEXIO95424 95 aa16.21■□□□□ 0.19
VRTN-202ENST00000557177 BCAR1P56945 870 aa16.21■□□□□ 0.19
VRTN-202ENST00000557177 PTPN21Q16825 1174 aa16.21■□□□□ 0.19
VRTN-202ENST00000557177 ZNF410Q86VK4 478 aa16.21■□□□□ 0.19
VRTN-202ENST00000557177 FBXL6Q8N531 539 aa16.21■□□□□ 0.19
VRTN-202ENST00000557177 CASP10Q92851 521 aa16.21■□□□□ 0.19
VRTN-202ENST00000557177 ZNF274Q96GC6 653 aaPredicted RBP16.21■□□□□ 0.19
VRTN-202ENST00000557177 SH2D3AQ9BRG2 576 aa16.21■□□□□ 0.19
VRTN-202ENST00000557177 FDXACB1Q9BRP7 624 aaPredicted RBP16.21■□□□□ 0.19
VRTN-202ENST00000557177 APOL5Q9BWW9 433 aa16.21■□□□□ 0.19
VRTN-202ENST00000557177 DMDP11532 3685 aa16.2■□□□□ 0.18
VRTN-202ENST00000557177 CLASP2O75122 1294 aaKnown RBP16.2■□□□□ 0.18
VRTN-202ENST00000557177 MAFO75444 373 aaPredicted RBP16.2■□□□□ 0.18
VRTN-202ENST00000557177 SFPQP23246 707 aaKnown RBP eCLIP16.2■□□□□ 0.18
VRTN-202ENST00000557177 ALDH7A1P49419 539 aaKnown RBP16.2■□□□□ 0.18
VRTN-202ENST00000557177 DNM2P50570 870 aa16.2■□□□□ 0.18
VRTN-202ENST00000557177 GALNT17Q6IS24 598 aa16.2■□□□□ 0.18
VRTN-202ENST00000557177 ANO5Q75V66 913 aa16.2■□□□□ 0.18
VRTN-202ENST00000557177 TMEM173Q86WV6 379 aaPredicted RBP16.2■□□□□ 0.18
VRTN-202ENST00000557177 SUGP1Q8IWZ8 645 aaKnown RBP16.2■□□□□ 0.18
VRTN-202ENST00000557177 AIFM3Q96NN9 605 aa16.2■□□□□ 0.18
VRTN-202ENST00000557177 SUCLA2Q9P2R7 463 aaPredicted RBP16.2■□□□□ 0.18
VRTN-202ENST00000557177 CDH22Q9UJ99 828 aa16.2■□□□□ 0.18
VRTN-202ENST00000557177 NT5C1B-RDH14C9J2C7 533 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 SLC37A4O43826 429 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 ITIH3Q06033 890 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 NONOQ15233 471 aaKnown RBP eCLIP16.19■□□□□ 0.18
VRTN-202ENST00000557177 TPRNQ4KMQ1 711 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 TWF2Q6IBS0 349 aaKnown RBP16.19■□□□□ 0.18
VRTN-202ENST00000557177 RHPN2Q8IUC4 686 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 LPPQ93052 612 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 TMEM169Q96HH4 297 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 NECTIN4Q96NY8 510 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 PRRX2Q99811 253 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 TM6SF1Q9BZW5 370 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 INO80BQ9C086 356 aaPredicted RBP16.19■□□□□ 0.18
VRTN-202ENST00000557177 ZBP1Q9H171 429 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 ADAM7Q9H2U9 754 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 FAM105AQ9NUU6 356 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 DDX25Q9UHL0 483 aaKnown RBP16.19■□□□□ 0.18
VRTN-202ENST00000557177 PIN4Q9Y237 131 aaKnown RBP16.19■□□□□ 0.18
VRTN-202ENST00000557177 IRAK3Q9Y616 596 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
VRTN-202ENST00000557177 CARNS1A5YM72 827 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 MEIS3P2A8K0S8 358 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 DDX11L8A8MPP1 907 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 EML1O00423 815 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 CPLX1O14810 134 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 ZNF623O75123 536 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 ZC3H11AO75152 810 aaKnown RBP eCLIP16.18■□□□□ 0.18
VRTN-202ENST00000557177 SKIP12755 728 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 PTPN5P54829 565 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 PSMC5P62195 406 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 TCF15Q12870 199 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 PPP2R5CQ13362 524 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 INF2Q27J81 1249 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 PLA2G4FQ68DD2 849 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 KSR1Q8IVT5 923 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 VPS52Q8N1B4 723 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 IGSF21Q96ID5 467 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 PHOX2BQ99453 314 aa16.18■□□□□ 0.18
VRTN-202ENST00000557177 POMKQ9H5K3 350 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms