RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 SMG7Q92540 1137 aaKnown RBP14.34□□□□□ -0.11
PSEN1-220ENST00000557037 TNPO1Q92973 898 aaKnown RBP14.34□□□□□ -0.11
PSEN1-220ENST00000557037 GPRASP2Q96D09 838 aa14.34□□□□□ -0.11
PSEN1-220ENST00000557037 DDX23Q9BUQ8 820 aaKnown RBP14.34□□□□□ -0.11
PSEN1-220ENST00000557037 RNF41Q9H4P4 317 aaPredicted RBP14.34□□□□□ -0.11
PSEN1-220ENST00000557037 DDX19BQ9UMR2 479 aa14.34□□□□□ -0.11
PSEN1-220ENST00000557037 RETP07949 1114 aa14.33□□□□□ -0.12
PSEN1-220ENST00000557037 ZSCAN20P17040 1043 aaPredicted RBP14.33□□□□□ -0.12
PSEN1-220ENST00000557037 ITGB5P18084 799 aa14.33□□□□□ -0.12
PSEN1-220ENST00000557037 CRYBB1P53674 252 aaPredicted RBP14.33□□□□□ -0.12
PSEN1-220ENST00000557037 SLC44A4Q53GD3 710 aa14.33□□□□□ -0.12
PSEN1-220ENST00000557037 FAM227BQ96M60 508 aa14.33□□□□□ -0.12
PSEN1-220ENST00000557037 MYL10Q9BUA6 226 aa14.33□□□□□ -0.12
PSEN1-220ENST00000557037 MRPL9Q9BYD2 267 aaKnown RBP14.33□□□□□ -0.12
PSEN1-220ENST00000557037 LTB4R2Q9NPC1 389 aa14.33□□□□□ -0.12
PSEN1-220ENST00000557037 MAD2L2Q9UI95 211 aa14.33□□□□□ -0.12
PSEN1-220ENST00000557037 LHX6Q9UPM6 363 aa14.33□□□□□ -0.12
PSEN1-220ENST00000557037 TTC41PQ6P2S7 1318 aa14.33□□□□□ -0.12
PSEN1-220ENST00000557037 AKAP13Q12802 2813 aa14.33□□□□□ -0.12
PSEN1-220ENST00000557037 ITPR1Q14643 2758 aa14.32□□□□□ -0.12
PSEN1-220ENST00000557037 A0A0D9SFI3 127 aa14.32□□□□□ -0.12
PSEN1-220ENST00000557037 B4E1Z4 1266 aa14.32□□□□□ -0.12
PSEN1-220ENST00000557037 VTNP04004 478 aa14.32□□□□□ -0.12
PSEN1-220ENST00000557037 STAT5BP51692 787 aa14.32□□□□□ -0.12
PSEN1-220ENST00000557037 CSRP2Q16527 193 aa14.32□□□□□ -0.12
PSEN1-220ENST00000557037 CDHR1Q96JP9 859 aa14.32□□□□□ -0.12
PSEN1-220ENST00000557037 PIDD1Q9HB75 910 aa14.32□□□□□ -0.12
PSEN1-220ENST00000557037 JPH1Q9HDC5 661 aaPredicted RBP14.32□□□□□ -0.12
PSEN1-220ENST00000557037 PRMT8Q9NR22 394 aaPredicted RBP14.32□□□□□ -0.12
PSEN1-220ENST00000557037 HELLSQ9NRZ9 838 aa14.32□□□□□ -0.12
PSEN1-220ENST00000557037 MYH15Q9Y2K3 1946 aa14.32□□□□□ -0.12
PSEN1-220ENST00000557037 F5P12259 2224 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 C2CD2LO14523 706 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 LRP3O75074 770 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 GPR32O75388 356 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 GALTP07902 379 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 SPATA31D3P0C874 917 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 RING1Q06587 406 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 TRAF1Q13077 416 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 MTAPQ13126 283 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 MTMR1Q13613 665 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 LONRF3Q496Y0 759 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 ZBTB41Q5SVQ8 909 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 PARM1Q6UWI2 310 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 SPATA31D4Q6ZUB0 917 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 PLPPR4Q7Z2D5 763 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 ZNF598Q86UK7 904 aaKnown RBP14.31□□□□□ -0.12
PSEN1-220ENST00000557037 ZNF589Q86UQ0 364 aaPredicted RBP14.31□□□□□ -0.12
PSEN1-220ENST00000557037 KDF1Q8NAX2 398 aaPredicted RBP14.31□□□□□ -0.12
PSEN1-220ENST00000557037 FGF14Q92915 247 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 ZNF707Q96C28 371 aaPredicted RBP14.31□□□□□ -0.12
PSEN1-220ENST00000557037 OSBPL6Q9BZF3 934 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 GBP3Q9H0R5 595 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.31□□□□□ -0.12
PSEN1-220ENST00000557037 SLC9A2Q9UBY0 812 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 DOCK6Q96HP0 2047 aa14.31□□□□□ -0.12
PSEN1-220ENST00000557037 PNMA6FA0A0J9YX94 578 aa14.3□□□□□ -0.12
PSEN1-220ENST00000557037 PALM3A6NDB9 673 aaPredicted RBP14.3□□□□□ -0.12
PSEN1-220ENST00000557037 TARSP26639 723 aaKnown RBP14.3□□□□□ -0.12
PSEN1-220ENST00000557037 MAGEA9P43362 315 aa14.3□□□□□ -0.12
PSEN1-220ENST00000557037 ACTR2P61160 394 aa14.3□□□□□ -0.12
PSEN1-220ENST00000557037 PRKCQQ04759 706 aa14.3□□□□□ -0.12
PSEN1-220ENST00000557037 MCMDC2Q4G0Z9 681 aa14.3□□□□□ -0.12
PSEN1-220ENST00000557037 METTL13Q8N6R0 699 aa14.3□□□□□ -0.12
PSEN1-220ENST00000557037 CELF5Q8N6W0 485 aaKnown RBP14.3□□□□□ -0.12
PSEN1-220ENST00000557037 CUL5Q93034 780 aa14.3□□□□□ -0.12
PSEN1-220ENST00000557037 CLDN23Q96B33 292 aa14.3□□□□□ -0.12
PSEN1-220ENST00000557037 ZNF668Q96K58 619 aaPredicted RBP14.3□□□□□ -0.12
PSEN1-220ENST00000557037 FAM126AQ9BYI3 521 aaPredicted RBP14.3□□□□□ -0.12
PSEN1-220ENST00000557037 NRDE2Q9H7Z3 1164 aa14.3□□□□□ -0.12
PSEN1-220ENST00000557037 DNAJB4Q9UDY4 337 aa14.3□□□□□ -0.12
PSEN1-220ENST00000557037 INPP5FQ9Y2H2 1132 aa14.3□□□□□ -0.12
PSEN1-220ENST00000557037 ZMYM6O95789 1325 aa14.3□□□□□ -0.12
PSEN1-220ENST00000557037 IGSF10Q6WRI0 2623 aa14.29□□□□□ -0.12
PSEN1-220ENST00000557037 SRRM3A6NNA2 597 aaPredicted RBP14.29□□□□□ -0.12
PSEN1-220ENST00000557037 CYTH3O43739 400 aa14.29□□□□□ -0.12
PSEN1-220ENST00000557037 LILRB3O75022 631 aa14.29□□□□□ -0.12
PSEN1-220ENST00000557037 SLC11A1P49279 550 aa14.29□□□□□ -0.12
PSEN1-220ENST00000557037 AK2P54819 239 aa14.29□□□□□ -0.12
PSEN1-220ENST00000557037 IFIT1BQ5T764 474 aaKnown RBP14.29□□□□□ -0.12
PSEN1-220ENST00000557037 LPPQ93052 612 aa14.29□□□□□ -0.12
PSEN1-220ENST00000557037 RIOX1Q9H6W3 641 aa14.29□□□□□ -0.12
PSEN1-220ENST00000557037 MRPL17Q9NRX2 175 aaKnown RBP14.29□□□□□ -0.12
PSEN1-220ENST00000557037 FAM217BQ9NTX9 383 aaPredicted RBP14.29□□□□□ -0.12
PSEN1-220ENST00000557037 ZSWIM5Q9P217 1185 aa14.29□□□□□ -0.12
PSEN1-220ENST00000557037 UBIAD1Q9Y5Z9 338 aa14.29□□□□□ -0.12
PSEN1-220ENST00000557037 A0A0U1RQF3 1178 aa14.28□□□□□ -0.12
PSEN1-220ENST00000557037 MEIS2O14770 477 aa14.28□□□□□ -0.12
PSEN1-220ENST00000557037 ZNF213O14771 459 aa14.28□□□□□ -0.12
PSEN1-220ENST00000557037 B4GALT3O60512 393 aa14.28□□□□□ -0.12
PSEN1-220ENST00000557037 MS4A1P11836 297 aa14.28□□□□□ -0.12
PSEN1-220ENST00000557037 TDGF1P13385 188 aa14.28□□□□□ -0.12
PSEN1-220ENST00000557037 SPINK2P20155 84 aa14.28□□□□□ -0.12
PSEN1-220ENST00000557037 FGFR4P22455 802 aa14.28□□□□□ -0.12
PSEN1-220ENST00000557037 RNASELQ05823 741 aaKnown RBP14.28□□□□□ -0.12
PSEN1-220ENST00000557037 SIM2Q14190 667 aaPredicted RBP14.28□□□□□ -0.12
PSEN1-220ENST00000557037 AASDHQ4L235 1098 aaPredicted RBP14.28□□□□□ -0.12
PSEN1-220ENST00000557037 CYP26C1Q6V0L0 522 aa14.28□□□□□ -0.12
PSEN1-220ENST00000557037 TPRG1Q6ZUI0 275 aa14.28□□□□□ -0.12
PSEN1-220ENST00000557037 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms