RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 GLB1LQ6UWU2 654 aa5.97□□□□□ -1.45
ATXN3-246ENST00000557030 DBX2Q6ZNG2 339 aa5.97□□□□□ -1.45
ATXN3-246ENST00000557030 GPR155Q7Z3F1 870 aa5.97□□□□□ -1.45
ATXN3-246ENST00000557030 DHX37Q8IY37 1157 aaKnown RBP5.97□□□□□ -1.45
ATXN3-246ENST00000557030 SYNPOQ8N3V7 929 aa5.97□□□□□ -1.45
ATXN3-246ENST00000557030 AFAP1Q8N556 730 aa5.97□□□□□ -1.45
ATXN3-246ENST00000557030 WWC2-AS2Q96NR7 200 aa5.97□□□□□ -1.45
ATXN3-246ENST00000557030 RCAN3Q9UKA8 241 aa5.97□□□□□ -1.45
ATXN3-246ENST00000557030 TMA7Q9Y2S6 64 aaKnown RBP5.97□□□□□ -1.45
ATXN3-246ENST00000557030 ZFYVE16Q7Z3T8 1539 aa5.97□□□□□ -1.45
ATXN3-246ENST00000557030 CCDC144AA2RUR9 1427 aa5.97□□□□□ -1.45
ATXN3-246ENST00000557030 SPAG9O60271 1321 aaKnown RBP5.97□□□□□ -1.45
ATXN3-246ENST00000557030 LAMC1P11047 1609 aa5.96□□□□□ -1.45
ATXN3-246ENST00000557030 ST20-MTHFSA0A0A6YYL1 179 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 FOXP2O15409 715 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 ZNF20P17024 532 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 ECE1P42892 770 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 TMEM132BQ14DG7 1078 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 CDSNQ15517 529 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 TMEM200BQ69YZ2 307 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 TRIM68Q6AZZ1 485 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 CC2D1AQ6P1N0 951 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-246ENST00000557030 RTN4RL1Q86UN2 441 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-246ENST00000557030 C8orf49Q96NF6 230 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 GBP4Q96PP9 640 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 ORAI3Q9BRQ5 295 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 POLR3GLQ9BT43 218 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 BOCQ9BWV1 1114 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 OR10A5Q9H207 317 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 UCKL1Q9NWZ5 548 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 MAGEC2Q9UBF1 373 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-246ENST00000557030 FBXO10Q9UK96 956 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 MYRFQ9Y2G1 1151 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 PTPRTO14522 1441 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 VWDEQ8N2E2 1590 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 INO80Q9ULG1 1556 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-246ENST00000557030 DEPDC5O75140 1603 aa5.96□□□□□ -1.46
ATXN3-246ENST00000557030 E9PCH4 1651 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 FAM83GA6ND36 823 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 NPEPPSL1A6NEC2 478 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 KPNA6O60684 536 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 HIP1RO75146 1068 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 FLT3P36888 993 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 HSPA2P54652 639 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 IRF9Q00978 393 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 NFYCQ13952 458 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 ARHGAP44Q17R89 818 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 CFAP100Q494V2 611 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 CREB3L3Q68CJ9 461 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 CDCA2Q69YH5 1023 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-246ENST00000557030 SDE2Q6IQ49 451 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 UBE2R2Q712K3 238 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-246ENST00000557030 LARP4Q71RC2 724 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATXN3-246ENST00000557030 CIR1Q86X95 450 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-246ENST00000557030 NIM1KQ8IY84 436 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 BCL6BQ8N143 479 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-246ENST00000557030 NINJ1Q92982 152 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 LOXL4Q96JB6 756 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 FEZ1Q99689 392 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 KRTAP4-5Q9BYR2 181 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 FANCAO15360 1455 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 PTPRMP28827 1452 aa5.95□□□□□ -1.46
ATXN3-246ENST00000557030 PRDM15P57071 1507 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-246ENST00000557030 ATP7AQ04656 1500 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 PARD3Q8TEW0 1356 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 SCAPERQ9BY12 1400 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 MATN2O00339 956 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 FNTBP49356 437 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 NEK4P51957 841 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 CD83Q01151 205 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 R3HDM1Q15032 1099 aaKnown RBP5.94□□□□□ -1.46
ATXN3-246ENST00000557030 TBR1Q16650 682 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 RNF151Q2KHN1 245 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 ZXDCQ2QGD7 858 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-246ENST00000557030 CHST14Q8NCH0 376 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 EXOC6Q8TAG9 804 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 SCYL1Q96KG9 808 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 TESK2Q96S53 571 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 CABP5Q9NP86 173 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 ST6GALNAC2Q9UJ37 374 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 MROH1Q8NDA8 1641 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 TRPM2O94759 1503 aa5.94□□□□□ -1.46
ATXN3-246ENST00000557030 RNF17Q9BXT8 1623 aaKnown RBP5.93□□□□□ -1.46
ATXN3-246ENST00000557030 PTPDC1A2A3K4 754 aa5.93□□□□□ -1.46
ATXN3-246ENST00000557030 PRAMEF22A3QJZ6 481 aa5.93□□□□□ -1.46
ATXN3-246ENST00000557030 ENPP3O14638 875 aa5.93□□□□□ -1.46
ATXN3-246ENST00000557030 ALDH6A1Q02252 535 aaKnown RBP5.93□□□□□ -1.46
ATXN3-246ENST00000557030 DUSP8Q13202 625 aa5.93□□□□□ -1.46
ATXN3-246ENST00000557030 WDR72Q3MJ13 1102 aa5.93□□□□□ -1.46
ATXN3-246ENST00000557030 DALRD3Q5D0E6 543 aaKnown RBP5.93□□□□□ -1.46
ATXN3-246ENST00000557030 LRRTM3Q86VH5 581 aa5.93□□□□□ -1.46
ATXN3-246ENST00000557030 Q8TCH9 128 aa5.93□□□□□ -1.46
ATXN3-246ENST00000557030 CFHR4Q92496 578 aa5.93□□□□□ -1.46
ATXN3-246ENST00000557030 ERCC4Q92889 916 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-246ENST00000557030 DVL3Q92997 716 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-246ENST00000557030 NEIL1Q96FI4 390 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-246ENST00000557030 BORCS6Q96GS4 357 aa5.93□□□□□ -1.46
ATXN3-246ENST00000557030 INTS7Q9NVH2 962 aaKnown RBP5.93□□□□□ -1.46
ATXN3-246ENST00000557030 B4GALT6Q9UBX8 382 aa5.93□□□□□ -1.46
ATXN3-246ENST00000557030 CLTCL1P53675 1640 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms