RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 MYO10Q9HD67 2058 aa20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 USP34Q70CQ2 3546 aa20.61■□□□□ 0.89
VIPAS39-209ENST00000556909 TMEM150BA6NC51 233 aa20.6■□□□□ 0.89
VIPAS39-209ENST00000556909 TDP2O95551 362 aa20.6■□□□□ 0.89
VIPAS39-209ENST00000556909 SP100P23497 879 aaPredicted RBP20.6■□□□□ 0.89
VIPAS39-209ENST00000556909 MTERF2Q49AM1 385 aa20.6■□□□□ 0.89
VIPAS39-209ENST00000556909 B3GNT9Q6UX72 402 aa20.6■□□□□ 0.89
VIPAS39-209ENST00000556909 MIER3Q7Z3K6 550 aa20.6■□□□□ 0.89
VIPAS39-209ENST00000556909 CASP10Q92851 521 aa20.6■□□□□ 0.89
VIPAS39-209ENST00000556909 NIFKQ9BYG3 293 aaKnown RBP20.6■□□□□ 0.89
VIPAS39-209ENST00000556909 GCOM2Q9BZD3 368 aaPredicted RBP20.6■□□□□ 0.89
VIPAS39-209ENST00000556909 CDH22Q9UJ99 828 aa20.6■□□□□ 0.89
VIPAS39-209ENST00000556909 HCFC2Q9Y5Z7 792 aa20.6■□□□□ 0.89
VIPAS39-209ENST00000556909 DENND4AQ7Z401 1863 aa20.6■□□□□ 0.89
VIPAS39-209ENST00000556909 IGKV6-21A0A0C4DH24 114 aa20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 C2orf71A6NGG8 1288 aa20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 STBD1O95210 358 aa20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 PSMA5P28066 241 aa20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 PTPN5P54829 565 aa20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 BCAR1P56945 870 aa20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 XKR3Q5GH77 459 aa20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 MRPL43Q8N983 215 aaKnown RBP20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 PHOX2BQ99453 314 aa20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 C22orf23Q9BZE7 217 aa20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 PCDHA4Q9UN74 947 aa20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 ARID2Q68CP9 1835 aa20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 CACNA1HO95180 2353 aa20.59■□□□□ 0.89
VIPAS39-209ENST00000556909 CYP3A7-CYP3A51PA0A087WV96 503 aa20.58■□□□□ 0.89
VIPAS39-209ENST00000556909 NT5C1B-RDH14C9J2C7 533 aa20.58■□□□□ 0.89
VIPAS39-209ENST00000556909 CYP3A7P24462 503 aa20.58■□□□□ 0.89
VIPAS39-209ENST00000556909 PHKA2P46019 1235 aa20.58■□□□□ 0.89
VIPAS39-209ENST00000556909 TRIM22Q8IYM9 498 aa20.58■□□□□ 0.89
VIPAS39-209ENST00000556909 PRRX2Q99811 253 aa20.58■□□□□ 0.89
VIPAS39-209ENST00000556909 SH2D3AQ9BRG2 576 aa20.58■□□□□ 0.89
VIPAS39-209ENST00000556909 CHST12Q9NRB3 414 aa20.58■□□□□ 0.89
VIPAS39-209ENST00000556909 A0A087WZ62 844 aa20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 M0R2N6 131 aa20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 CLASP2O75122 1294 aaKnown RBP20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 SFPQP23246 707 aaKnown RBP eCLIP20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 ALDH7A1P49419 539 aaKnown RBP20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 VCPP55072 806 aaKnown RBP20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 CDC42EP1Q00587 391 aa20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 TCF15Q12870 199 aa20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 TOB2Q14106 344 aaPredicted RBP20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 TPRNQ4KMQ1 711 aa20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 TMEM173Q86WV6 379 aaPredicted RBP20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 ETNPPLQ8TBG4 499 aa20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 MBOAT7Q96N66 472 aa20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 FDXACB1Q9BRP7 624 aaPredicted RBP20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 TRAIPQ9BWF2 469 aa20.57■□□□□ 0.88
VIPAS39-209ENST00000556909 ZC3H11AO75152 810 aaKnown RBP eCLIP20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 CA8P35219 290 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 SSRP1Q08945 709 aaKnown RBP20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 NPY5RQ15761 445 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 TWF2Q6IBS0 349 aaKnown RBP20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 RUFY3Q7L099 469 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 ZNF410Q86VK4 478 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 BLIDQ8IZY5 108 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 DAGLBQ8NCG7 672 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 RSPH1Q8WYR4 309 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 LPPQ93052 612 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 TMEM169Q96HH4 297 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 ZBP1Q9H171 429 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 ADAM7Q9H2U9 754 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 POMKQ9H5K3 350 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 TSHZ2Q9NRE2 1034 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 PIN4Q9Y237 131 aaKnown RBP20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 NR2E1Q9Y466 385 aa20.56■□□□□ 0.88
VIPAS39-209ENST00000556909 REC8O95072 547 aa20.55■□□□□ 0.88
VIPAS39-209ENST00000556909 DEXIO95424 95 aa20.55■□□□□ 0.88
VIPAS39-209ENST00000556909 DNM2P50570 870 aa20.55■□□□□ 0.88
VIPAS39-209ENST00000556909 ITIH3Q06033 890 aa20.55■□□□□ 0.88
VIPAS39-209ENST00000556909 CES5AQ6NT32 575 aa20.55■□□□□ 0.88
VIPAS39-209ENST00000556909 MOXD1Q6UVY6 613 aa20.55■□□□□ 0.88
VIPAS39-209ENST00000556909 ZBTB33Q86T24 672 aa20.55■□□□□ 0.88
VIPAS39-209ENST00000556909 RHPN2Q8IUC4 686 aa20.55■□□□□ 0.88
VIPAS39-209ENST00000556909 NECTIN4Q96NY8 510 aa20.55■□□□□ 0.88
VIPAS39-209ENST00000556909 SUCLA2Q9P2R7 463 aaPredicted RBP20.55■□□□□ 0.88
VIPAS39-209ENST00000556909 C2orf16Q68DN1 1984 aa20.55■□□□□ 0.88
VIPAS39-209ENST00000556909 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 MEIS3P2A8K0S8 358 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 C2CD4DB7Z1M9 353 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 MAFO75444 373 aaPredicted RBP20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 LONRF3Q496Y0 759 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 PLA2G4FQ68DD2 849 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 ANO5Q75V66 913 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 KSR1Q8IVT5 923 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 VPS52Q8N1B4 723 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 KREMEN2Q8NCW0 462 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 AUTS2Q8WXX7 1259 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 NLRP4Q96MN2 994 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 AIFM3Q96NN9 605 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 ZSWIM6Q9HCJ5 1215 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 FAM105AQ9NUU6 356 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 TBC1D13Q9NVG8 400 aa20.54■□□□□ 0.88
VIPAS39-209ENST00000556909 DDX11L8A8MPP1 907 aa20.53■□□□□ 0.88
VIPAS39-209ENST00000556909 CPLX1O14810 134 aa20.53■□□□□ 0.88
VIPAS39-209ENST00000556909 SLC37A4O43826 429 aa20.53■□□□□ 0.88
VIPAS39-209ENST00000556909 CXCL14O95715 111 aa20.53■□□□□ 0.88
VIPAS39-209ENST00000556909 SKIP12755 728 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms