RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 IFNAR1P17181 557 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 PDIA3P30101 505 aaKnown RBP16.64■□□□□ 0.25
CHD8-211ENST00000556833 PPM1AP35813 382 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 JAK3P52333 1124 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 BCAR1P56945 870 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 SIGLEC14Q08ET2 396 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 KCNC3Q14003 757 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 PTPN21Q16825 1174 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 RARS2Q5T160 578 aaKnown RBP16.64■□□□□ 0.25
CHD8-211ENST00000556833 TWF2Q6IBS0 349 aaKnown RBP16.64■□□□□ 0.25
CHD8-211ENST00000556833 PDE12Q6L8Q7 609 aaKnown RBP16.64■□□□□ 0.25
CHD8-211ENST00000556833 RHPN2Q8IUC4 686 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 SLC39A11Q8N1S5 342 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 FBXL6Q8N531 539 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 KCNB2Q92953 911 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 NLRP4Q96MN2 994 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 PIN4Q9Y237 131 aaKnown RBP16.64■□□□□ 0.25
CHD8-211ENST00000556833 HCFC2Q9Y5Z7 792 aa16.64■□□□□ 0.25
CHD8-211ENST00000556833 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.63■□□□□ 0.25
CHD8-211ENST00000556833 C2orf71A6NGG8 1288 aa16.63■□□□□ 0.25
CHD8-211ENST00000556833 DDX11L8A8MPP1 907 aa16.63■□□□□ 0.25
CHD8-211ENST00000556833 CLASP2O75122 1294 aaKnown RBP16.63■□□□□ 0.25
CHD8-211ENST00000556833 SMC1AQ14683 1233 aaKnown RBP16.63■□□□□ 0.25
CHD8-211ENST00000556833 ZNF598Q86UK7 904 aaKnown RBP16.63■□□□□ 0.25
CHD8-211ENST00000556833 RIT2Q99578 217 aa16.63■□□□□ 0.25
CHD8-211ENST00000556833 GCOM2Q9BZD3 368 aaPredicted RBP16.63■□□□□ 0.25
CHD8-211ENST00000556833 KCNH6Q9H252 994 aa16.63■□□□□ 0.25
CHD8-211ENST00000556833 POMKQ9H5K3 350 aa16.63■□□□□ 0.25
CHD8-211ENST00000556833 NGRNQ9NPE2 291 aaKnown RBP16.63■□□□□ 0.25
CHD8-211ENST00000556833 A0A0U1RQF3 1178 aa16.62■□□□□ 0.25
CHD8-211ENST00000556833 C2CD4DB7Z1M9 353 aa16.62■□□□□ 0.25
CHD8-211ENST00000556833 PSMD10O75832 226 aa16.62■□□□□ 0.25
CHD8-211ENST00000556833 CXCL14O95715 111 aa16.62■□□□□ 0.25
CHD8-211ENST00000556833 SSBP05455 408 aaKnown RBP eCLIP16.62■□□□□ 0.25
CHD8-211ENST00000556833 SFNP31947 248 aa16.62■□□□□ 0.25
CHD8-211ENST00000556833 SSRP1Q08945 709 aaKnown RBP16.62■□□□□ 0.25
CHD8-211ENST00000556833 TCF15Q12870 199 aa16.62■□□□□ 0.25
CHD8-211ENST00000556833 TOB2Q14106 344 aaPredicted RBP16.62■□□□□ 0.25
CHD8-211ENST00000556833 TARBP2Q15633 366 aaKnown RBP16.62■□□□□ 0.25
CHD8-211ENST00000556833 VPS52Q8N1B4 723 aa16.62■□□□□ 0.25
CHD8-211ENST00000556833 TMEM87AQ8NBN3 555 aa16.62■□□□□ 0.25
CHD8-211ENST00000556833 BCL7CQ8WUZ0 217 aaPredicted RBP16.62■□□□□ 0.25
CHD8-211ENST00000556833 ASIC4Q96FT7 647 aa16.62■□□□□ 0.25
CHD8-211ENST00000556833 TMEM169Q96HH4 297 aa16.62■□□□□ 0.25
CHD8-211ENST00000556833 SUCLA2Q9P2R7 463 aaPredicted RBP16.62■□□□□ 0.25
CHD8-211ENST00000556833 FSD2A1L4K1 749 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 SLC37A4O43826 429 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 STBD1O95210 358 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 ASGR2P07307 311 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 EPCAMP16422 314 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 PHKA2P46019 1235 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 ALDH7A1P49419 539 aaKnown RBP16.61■□□□□ 0.25
CHD8-211ENST00000556833 USP11P51784 963 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 INF2Q27J81 1249 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 TMEM184AQ6ZMB5 413 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 CATSPER4Q7RTX7 472 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 BMP8AQ7Z5Y6 402 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 TRIM22Q8IYM9 498 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 BLIDQ8IZY5 108 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 MRPL43Q8N983 215 aaKnown RBP16.61■□□□□ 0.25
CHD8-211ENST00000556833 KREMEN2Q8NCW0 462 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 CASP10Q92851 521 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 DACT1Q9NYF0 836 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 DNAJB4Q9UDY4 337 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 PCDHA4Q9UN74 947 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 KCNJ14Q9UNX9 436 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 ARID2Q68CP9 1835 aa16.61■□□□□ 0.25
CHD8-211ENST00000556833 C2orf16Q68DN1 1984 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 USP34Q70CQ2 3546 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 EML1O00423 815 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 CPLX1O14810 134 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 B4GALT3O60512 393 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 SFPQP23246 707 aaKnown RBP eCLIP16.6■□□□□ 0.25
CHD8-211ENST00000556833 PSMA5P28066 241 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 PTPN5P54829 565 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 NPEPPSP55786 919 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 RNASELQ05823 741 aaKnown RBP16.6■□□□□ 0.25
CHD8-211ENST00000556833 Q4G0T1 1027 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 TPRNQ4KMQ1 711 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 XKR3Q5GH77 459 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 CES5AQ6NT32 575 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 ZNF579Q8NAF0 562 aaKnown RBP16.6■□□□□ 0.25
CHD8-211ENST00000556833 CEP89Q96ST8 783 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 MRPL9Q9BYD2 267 aaKnown RBP16.6■□□□□ 0.25
CHD8-211ENST00000556833 AGXT2Q9BYV1 514 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 SLKQ9H2G2 1235 aaPredicted RBP16.6■□□□□ 0.25
CHD8-211ENST00000556833 NRDE2Q9H7Z3 1164 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 TBC1D13Q9NVG8 400 aa16.6■□□□□ 0.25
CHD8-211ENST00000556833 SPDYE4A6NLX3 237 aa16.59■□□□□ 0.25
CHD8-211ENST00000556833 BRD1O95696 1058 aa16.59■□□□□ 0.25
CHD8-211ENST00000556833 EOMESO95936 686 aa16.59■□□□□ 0.25
CHD8-211ENST00000556833 MYBP10242 640 aa16.59■□□□□ 0.25
CHD8-211ENST00000556833 DNM2P50570 870 aa16.59■□□□□ 0.25
CHD8-211ENST00000556833 LETM2Q2VYF4 491 aa16.59■□□□□ 0.25
CHD8-211ENST00000556833 ANO5Q75V66 913 aa16.59■□□□□ 0.25
CHD8-211ENST00000556833 ETNPPLQ8TBG4 499 aa16.59■□□□□ 0.25
CHD8-211ENST00000556833 NIFKQ9BYG3 293 aaKnown RBP16.59■□□□□ 0.25
CHD8-211ENST00000556833 ZBP1Q9H171 429 aa16.59■□□□□ 0.25
CHD8-211ENST00000556833 SH3GLB2Q9NR46 395 aa16.59■□□□□ 0.25
CHD8-211ENST00000556833 FAM105AQ9NUU6 356 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms