RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 GCOM2Q9BZD3 368 aaPredicted RBP19.4■□□□□ 0.7
SHMT2-225ENST00000556798 ERVK-5Q9HDB9 667 aa19.4■□□□□ 0.7
SHMT2-225ENST00000556798 SQORQ9Y6N5 450 aa19.4■□□□□ 0.7
SHMT2-225ENST00000556798 LAMA3Q16787 3333 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 NPHP3-ACAD11A0A0J9YXS1 232 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 HIP1RO75146 1068 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 BAIAP3O94812 1187 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 STAT6P42226 847 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 CDC42EP1Q00587 391 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 IKBKEQ14164 716 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 MXD4Q14582 209 aaPredicted RBP19.39■□□□□ 0.69
SHMT2-225ENST00000556798 RESP18Q5W5W9 173 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 CCDC73Q6ZRK6 1079 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 GPBP1Q86WP2 473 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 ZNF710Q8N1W2 664 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 APBB2Q92870 758 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 MTIF3Q9H2K0 278 aaKnown RBP19.39■□□□□ 0.69
SHMT2-225ENST00000556798 TMX1Q9H3N1 280 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 IFT122Q9HBG6 1241 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 STK17AQ9UEE5 414 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 ST3GAL5Q9UNP4 418 aa19.39■□□□□ 0.69
SHMT2-225ENST00000556798 ABHD14A-ACY1A0A1B0GW23 586 aa19.38■□□□□ 0.69
SHMT2-225ENST00000556798 A0A1W2PPC1 479 aa19.38■□□□□ 0.69
SHMT2-225ENST00000556798 ASAP2O43150 1006 aa19.38■□□□□ 0.69
SHMT2-225ENST00000556798 WDR5P61964 334 aaKnown RBP19.38■□□□□ 0.69
SHMT2-225ENST00000556798 DEFB103AP81534 67 aa19.38■□□□□ 0.69
SHMT2-225ENST00000556798 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
SHMT2-225ENST00000556798 TFDP1Q14186 410 aa19.38■□□□□ 0.69
SHMT2-225ENST00000556798 FAM109BQ6ICB4 259 aaPredicted RBP19.38■□□□□ 0.69
SHMT2-225ENST00000556798 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.38■□□□□ 0.69
SHMT2-225ENST00000556798 LINC01599Q8WXQ3 324 aa19.38■□□□□ 0.69
SHMT2-225ENST00000556798 MINDY3Q9H8M7 445 aa19.38■□□□□ 0.69
SHMT2-225ENST00000556798 SLC4A7Q9Y6M7 1214 aa19.38■□□□□ 0.69
SHMT2-225ENST00000556798 TTC3P53804 2025 aa19.37■□□□□ 0.69
SHMT2-225ENST00000556798 LRRIQ4A6NIV6 560 aa19.37■□□□□ 0.69
SHMT2-225ENST00000556798 PHKA2P46019 1235 aa19.37■□□□□ 0.69
SHMT2-225ENST00000556798 KCNJ6P48051 423 aa19.37■□□□□ 0.69
SHMT2-225ENST00000556798 MAPK7Q13164 816 aa19.37■□□□□ 0.69
SHMT2-225ENST00000556798 ARSHQ5FYA8 562 aa19.37■□□□□ 0.69
SHMT2-225ENST00000556798 TMCO2Q7Z6W1 182 aaPredicted RBP19.37■□□□□ 0.69
SHMT2-225ENST00000556798 DAW1Q8N136 415 aa19.37■□□□□ 0.69
SHMT2-225ENST00000556798 DHX58Q96C10 678 aa19.37■□□□□ 0.69
SHMT2-225ENST00000556798 FAM13BQ9NYF5 915 aa19.37■□□□□ 0.69
SHMT2-225ENST00000556798 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.36■□□□□ 0.69
SHMT2-225ENST00000556798 GRXCR1A8MXD5 290 aa19.36■□□□□ 0.69
SHMT2-225ENST00000556798 GPR182O15218 404 aa19.36■□□□□ 0.69
SHMT2-225ENST00000556798 MGEA5O60502 916 aa19.36■□□□□ 0.69
SHMT2-225ENST00000556798 GUCY2CP25092 1073 aa19.36■□□□□ 0.69
SHMT2-225ENST00000556798 E2F4Q16254 413 aa19.36■□□□□ 0.69
SHMT2-225ENST00000556798 ADALQ6DHV7 355 aa19.36■□□□□ 0.69
SHMT2-225ENST00000556798 KIFAP3Q92845 792 aa19.36■□□□□ 0.69
SHMT2-225ENST00000556798 REEP2Q9BRK0 252 aa19.36■□□□□ 0.69
SHMT2-225ENST00000556798 KIFC3Q9BVG8 833 aa19.36■□□□□ 0.69
SHMT2-225ENST00000556798 A0A1B0GVL5 298 aa19.35■□□□□ 0.69
SHMT2-225ENST00000556798 SFI1A8K8P3 1242 aa19.35■□□□□ 0.69
SHMT2-225ENST00000556798 POLR2DO15514 142 aaKnown RBP19.35■□□□□ 0.69
SHMT2-225ENST00000556798 KRT18P05783 430 aaKnown RBP19.35■□□□□ 0.69
SHMT2-225ENST00000556798 IBSPP21815 317 aaPredicted RBP19.35■□□□□ 0.69
SHMT2-225ENST00000556798 SFPQP23246 707 aaKnown RBP eCLIP19.35■□□□□ 0.69
SHMT2-225ENST00000556798 PTENP60484 403 aa19.35■□□□□ 0.69
SHMT2-225ENST00000556798 HABP4Q5JVS0 413 aaKnown RBP19.35■□□□□ 0.69
SHMT2-225ENST00000556798 ODR4Q5SWX8 454 aa19.35■□□□□ 0.69
SHMT2-225ENST00000556798 CATSPER4Q7RTX7 472 aa19.35■□□□□ 0.69
SHMT2-225ENST00000556798 SRGAP1Q7Z6B7 1085 aa19.35■□□□□ 0.69
SHMT2-225ENST00000556798 MYOCDQ8IZQ8 938 aa19.35■□□□□ 0.69
SHMT2-225ENST00000556798 DRC1Q96MC2 740 aa19.35■□□□□ 0.69
SHMT2-225ENST00000556798 INO80BQ9C086 356 aaPredicted RBP19.35■□□□□ 0.69
SHMT2-225ENST00000556798 KCND2Q9NZV8 630 aa19.35■□□□□ 0.69
SHMT2-225ENST00000556798 ADGRA3Q8IWK6 1321 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 INO80B-WBP1J3KQ70 363 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 EFCAB14O75071 495 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 PFKFB1P16118 471 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 ATP2A2P16615 1042 aaKnown RBP19.34■□□□□ 0.69
SHMT2-225ENST00000556798 CMA1P23946 247 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 PEX3P56589 373 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 MBTD1Q05BQ5 628 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 SV2BQ7L1I2 683 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 RTN4RL1Q86UN2 441 aaPredicted RBP19.34■□□□□ 0.69
SHMT2-225ENST00000556798 STAMQ92783 540 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 IFT74Q96LB3 600 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 SLC9A7Q96T83 725 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 TIPINQ9BVW5 301 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 FTHL17Q9BXU8 183 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 KCNH3Q9ULD8 1083 aa19.34■□□□□ 0.69
SHMT2-225ENST00000556798 DENND3A2RUS2 1198 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 MYMKA6NI61 221 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 CCDC169A6NNP5 214 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 SOX1O00570 391 aaPredicted RBP19.33■□□□□ 0.68
SHMT2-225ENST00000556798 ENPP3O14638 875 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 AMHP03971 560 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 NAMPTP43490 491 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 RABGGTBP53611 331 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 GIT2Q14161 759 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 PPP2R5AQ15172 486 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 LRIT3Q3SXY7 679 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 CDCA2Q69YH5 1023 aaPredicted RBP19.33■□□□□ 0.68
SHMT2-225ENST00000556798 FAM117BQ6P1L5 589 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 DYMQ7RTS9 669 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 IFNLR1Q8IU57 520 aaPredicted RBP19.33■□□□□ 0.68
SHMT2-225ENST00000556798 ZBTB8OSQ8IWT0 167 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms