RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 KLHL26Q53HC5 615 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 NAA35Q5VZE5 725 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 CAPRIN2Q6IMN6 1127 aaKnown RBP1.98□□□□□ -2.09
KTN1-224ENST00000556631 PRPF40BQ6NWY9 871 aaKnown RBP1.98□□□□□ -2.09
KTN1-224ENST00000556631 LLGL2Q6P1M3 1020 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 OLFML1Q6UWY5 402 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 MIGA2Q7L4E1 593 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 MCF2L2Q86YR7 1114 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 LIX1LQ8IVB5 337 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 ANKS4BQ8N8V4 417 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 GDAP1Q8TB36 358 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 ZSCAN18Q8TBC5 510 aaPredicted RBP1.98□□□□□ -2.09
KTN1-224ENST00000556631 KCNG4Q8TDN1 519 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 ST7LQ8TDW4 575 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 TUBGCP3Q96CW5 907 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 NUDT16Q96DE0 195 aaKnown RBP1.98□□□□□ -2.09
KTN1-224ENST00000556631 EDC3Q96F86 508 aaKnown RBP1.98□□□□□ -2.09
KTN1-224ENST00000556631 RNPC3Q96LT9 517 aaKnown RBP1.98□□□□□ -2.09
KTN1-224ENST00000556631 FAM193BQ96PV7 902 aaPredicted RBP1.98□□□□□ -2.09
KTN1-224ENST00000556631 FNBP1Q96RU3 617 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 MNTQ99583 582 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 SLC5A7Q9GZV3 580 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 RETREG1Q9H6L5 497 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 CASS4Q9NQ75 786 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 DNAJC11Q9NVH1 559 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 TMOD3Q9NYL9 352 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 EHD2Q9NZN4 543 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 SLC25A13Q9UJS0 675 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 CPSF3Q9UKF6 684 aaKnown RBP1.98□□□□□ -2.09
KTN1-224ENST00000556631 PNMA8BQ9ULN7 279 aaPredicted RBP1.98□□□□□ -2.09
KTN1-224ENST00000556631 AKT3Q9Y243 479 aa1.98□□□□□ -2.09
KTN1-224ENST00000556631 PIPSLA2A3N6 862 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 C2orf72A6NCS6 295 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 A6NL46 340 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 UBXN8O00124 270 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 PRODHO43272 600 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 AKR1B10O60218 316 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 SSX5O60225 188 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 CCNT2O60583 730 aaKnown RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 LUC7L3O95232 432 aaKnown RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 CAVIN2O95810 425 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 PROCP04070 461 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 S100A6P06703 90 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 ABCB1P08183 1280 aaPredicted RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 HSMCR30P0CW71 290 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 PDHBP11177 359 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 VAV1P15498 845 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 ATP2A2P16615 1042 aaKnown RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 SYT1P21579 422 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 GARTP22102 1010 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 EEF1B2P24534 225 aaKnown RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 HMOX2P30519 316 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 GDI1P31150 447 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 SARSP49591 514 aaKnown RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 LIG4P49917 911 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 PRSS12P56730 875 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 PPP4CP60510 307 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 GUCY1B3Q02153 619 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 TAP1Q03518 808 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 MAPRE2Q15555 327 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 STX1AQ16623 288 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 ANKDD1AQ495B1 522 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 LINC01559Q495D7 138 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 BMP2KLQ5H9B9 411 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 CCDC183Q5T5S1 534 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 SFMBT2Q5VUG0 894 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 DUSP27Q5VZP5 1158 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 SCYL2Q6P3W7 929 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 TUBA3EQ6PEY2 450 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 APOA5Q6Q788 366 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 USP53Q70EK8 1073 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 ZC3H18Q86VM9 953 aaKnown RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 RFX6Q8HWS3 928 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 GALNT13Q8IUC8 556 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 FAM178BQ8IXR5 827 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 CCDC13Q8IYE1 715 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 CACTIN-AS1Q8N1I8 211 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 KRT78Q8N1N4 520 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 FAM133AQ8N9E0 248 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 KLHL23Q8NBE8 558 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 CNNM3Q8NE01 707 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 GOLGA5Q8TBA6 731 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 ETNPPLQ8TBG4 499 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 FAM174AQ8TBP5 190 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 KCTD13Q8WZ19 329 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 GCC1Q96CN9 775 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 OMA1Q96E52 524 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 SAAL1Q96ER3 474 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 CDCA7LQ96GN5 454 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 ERO1AQ96HE7 468 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 HARBI1Q96MB7 349 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 TUBGCP2Q9BSJ2 902 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 AARSD1Q9BTE6 412 aaKnown RBP1.97□□□□□ -2.09
KTN1-224ENST00000556631 PKIBQ9C010 78 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 ARMT1Q9H993 441 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 VCX3AQ9NNX9 186 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 ABCB8Q9NUT2 735 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 TBC1D23Q9NUY8 699 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 NSMCE4AQ9NXX6 385 aa1.97□□□□□ -2.09
KTN1-224ENST00000556631 TRPC5Q9UL62 973 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms