RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TTF1Q15361 905 aaPredicted RBP6.21□□□□□ -1.42
SRP54-211ENST00000556445 MTERF2Q49AM1 385 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 STEAP3Q658P3 488 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 STYK1Q6J9G0 422 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 LILRA6Q6PI73 481 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 CENPQQ7L2Z9 268 aaPredicted RBP6.21□□□□□ -1.42
SRP54-211ENST00000556445 SP8Q8IXZ3 490 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 FEZF2Q8TBJ5 459 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 PPM1EQ8WY54 764 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 GORASP1Q9BQQ3 440 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 FAM126AQ9BYI3 521 aaPredicted RBP6.21□□□□□ -1.42
SRP54-211ENST00000556445 EPB41L1Q9H4G0 881 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 SPATA6Q9NWH7 488 aaPredicted RBP6.21□□□□□ -1.42
SRP54-211ENST00000556445 PFDN2Q9UHV9 154 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 NRBP1Q9UHY1 535 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 MAP3K19Q56UN5 1328 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 FANCIQ9NVI1 1328 aa6.21□□□□□ -1.42
SRP54-211ENST00000556445 PIK3C2AO00443 1686 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 TCRBV5S2A0A599 114 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 OTOL1A6NHN0 477 aaPredicted RBP6.2□□□□□ -1.42
SRP54-211ENST00000556445 CCDC85CA6NKD9 419 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 HGSO14964 777 aaPredicted RBP6.2□□□□□ -1.42
SRP54-211ENST00000556445 ZNF500O60304 480 aaPredicted RBP6.2□□□□□ -1.42
SRP54-211ENST00000556445 SASH1O94885 1247 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 FOSP01100 380 aaPredicted RBP6.2□□□□□ -1.42
SRP54-211ENST00000556445 HMOX1P09601 288 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 ATF3P18847 181 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 IFRD2Q12894 506 aaPredicted RBP6.2□□□□□ -1.42
SRP54-211ENST00000556445 PPP2R5AQ15172 486 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 CHRNA2Q15822 529 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 FOXB2Q5VYV0 432 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 ZKSCAN2Q63HK3 967 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 LBX2Q6XYB7 198 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 ZFYVE21Q9BQ24 234 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 JAM3Q9BX67 310 aa6.2□□□□□ -1.42
SRP54-211ENST00000556445 RGPD1P0DJD0 1748 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 BCAR3O75815 825 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 DGKIO75912 1065 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 STAT5AP42229 794 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 GPR85P60893 370 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 EXOSC9Q06265 439 aaKnown RBP6.19□□□□□ -1.42
SRP54-211ENST00000556445 SSRP1Q08945 709 aaKnown RBP6.19□□□□□ -1.42
SRP54-211ENST00000556445 MYBPC2Q14324 1141 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 CR1LQ2VPA4 569 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 DALRD3Q5D0E6 543 aaKnown RBP6.19□□□□□ -1.42
SRP54-211ENST00000556445 SULT6B1Q6IMI4 303 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 CD300LDQ6UXZ3 194 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 ZBTB38Q8NAP3 1195 aaPredicted RBP6.19□□□□□ -1.42
SRP54-211ENST00000556445 ARRDC4Q8NCT1 418 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 RTF1Q92541 710 aaKnown RBP6.19□□□□□ -1.42
SRP54-211ENST00000556445 ZBTB8AQ96BR9 441 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 C11orf84Q9BUA3 381 aaPredicted RBP6.19□□□□□ -1.42
SRP54-211ENST00000556445 TMX4Q9H1E5 349 aaPredicted RBP6.19□□□□□ -1.42
SRP54-211ENST00000556445 ANAPC4Q9UJX5 808 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 PCDHB4Q9Y5E5 795 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 SCINQ9Y6U3 715 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 IGSF1Q8N6C5 1336 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 DLG5Q8TDM6 1919 aa6.19□□□□□ -1.42
SRP54-211ENST00000556445 KDRP35968 1356 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 MST1RQ04912 1400 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 C1orf167Q5SNV9 1468 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 ALG1L2C9J202 215 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 HSP90AA1P07900 732 aaKnown RBP6.18□□□□□ -1.42
SRP54-211ENST00000556445 ZNF853P0CG23 659 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 COL6A1P12109 1028 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 HOXC9P31274 260 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 MAN1A1P33908 653 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 CTSWP56202 376 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 SMAD4Q13485 552 aaKnown RBP6.18□□□□□ -1.42
SRP54-211ENST00000556445 LRRC41Q15345 812 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 MAPRE1Q15691 268 aaKnown RBP6.18□□□□□ -1.42
SRP54-211ENST00000556445 KIZQ2M2Z5 673 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 ZNF280DQ6N043 979 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 PPP4R4Q6NUP7 873 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 ZC3H18Q86VM9 953 aaKnown RBP6.18□□□□□ -1.42
SRP54-211ENST00000556445 DDX42Q86XP3 938 aaKnown RBP eCLIP6.18□□□□□ -1.42
SRP54-211ENST00000556445 FTSJ3Q8IY81 847 aaKnown RBP6.18□□□□□ -1.42
SRP54-211ENST00000556445 CARFQ8N187 725 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.18□□□□□ -1.42
SRP54-211ENST00000556445 PIP4K2CQ8TBX8 421 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 IP6K1Q92551 441 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 ARHGAP45Q92619 1136 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 FRAT1Q92837 279 aaPredicted RBP6.18□□□□□ -1.42
SRP54-211ENST00000556445 PHACTR3Q96KR7 559 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 SPATA25Q9BR10 227 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 PCDH18Q9HCL0 1135 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 SMC4Q9NTJ3 1288 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 BABAM1Q9NWV8 329 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 RTEL1Q9NZ71 1219 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 PEAK1Q9H792 1746 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 SOS1Q07889 1333 aaPredicted RBP6.18□□□□□ -1.42
SRP54-211ENST00000556445 MSH6P52701 1360 aa6.18□□□□□ -1.42
SRP54-211ENST00000556445 PHRF1Q9P1Y6 1649 aaKnown RBP6.17□□□□□ -1.42
SRP54-211ENST00000556445 SHTN1A0MZ66 631 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 SCGB1D2O95969 90 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 FAM153BP0C7A2 387 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 GRK2P25098 689 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 THBS2P35442 1172 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 GRK3P35626 688 aa6.17□□□□□ -1.42
SRP54-211ENST00000556445 KCNC1P48547 511 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms