RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 BARX2Q9UMQ3 279 aaPredicted RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 TMX2Q9Y320 296 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 REXO2Q9Y3B8 237 aaKnown RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 COL11A1P12107 1806 aaPredicted RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 IGLV3-22A0A075B6J6 115 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 SLU7O95391 586 aaKnown RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 EIF4BP23588 611 aaKnown RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 HOXA13P31271 388 aaPredicted RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 KRT9P35527 623 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 STIM1Q13586 685 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 ELF2Q15723 593 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 CAPRIN2Q6IMN6 1127 aaKnown RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 FBXO11Q86XK2 927 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 GUF1Q8N442 669 aaKnown RBP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 GOLGA5Q8TBA6 731 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 FAM81AQ8TBF8 368 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 ANKRD49Q8WVL7 239 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 TBC1D5Q92609 795 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 PPP1R14BQ96C90 147 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 GLT8D2Q9H1C3 349 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 SPON1Q9HCB6 807 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 AGPAT5Q9NUQ2 364 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.53□□□□□ -1.52
TMEM260-210ENST00000556422 PHIPQ8WWQ0 1821 aa5.53□□□□□ -1.52
TMEM260-210ENST00000556422 PIK3CDO00329 1044 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 POLR3GO15318 223 aaPredicted RBP5.52□□□□□ -1.53
TMEM260-210ENST00000556422 EGFRP00533 1210 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 SPATA31C1P0DKV0 1188 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 CIITAP33076 1130 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 ARHGAP25P42331 645 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 NEK2P51955 445 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 STAT2P52630 851 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 SLC12A3P55017 1021 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 COX10Q12887 443 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 COASYQ13057 564 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 TRIM14Q14142 442 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 TAF11Q15544 211 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 ARSHQ5FYA8 562 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 MTMR14Q8NCE2 650 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 C2orf49Q9BVC5 232 aaPredicted RBP5.52□□□□□ -1.53
TMEM260-210ENST00000556422 ABCG4Q9H172 646 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 SYNCQ9H7C4 482 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 VAV3Q9UKW4 847 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 CAPN11Q9UMQ6 739 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 SCAF8Q9UPN6 1271 aaKnown RBP5.52□□□□□ -1.53
TMEM260-210ENST00000556422 FRMD3A2A2Y4 597 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 POTEFA5A3E0 1075 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 GOLGA6L9A6NEM1 432 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 WNT10BO00744 389 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 EPHB6O15197 1021 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 POTEIP0CG38 1075 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 KRT10P13645 584 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 PSMC6P62333 389 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 MAP3K10Q02779 954 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 LRRC41Q15345 812 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 DLGAP5Q15398 846 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 MEA1Q16626 185 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 ERCC6LQ2NKX8 1250 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 PRR16Q569H4 304 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 FAM83BQ5T0W9 1011 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 POTEGQ6S5H5 508 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 POTEEQ6S8J3 1075 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 CCDC121Q6ZUS5 278 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 CATSPER3Q86XQ3 398 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 NOC3LQ8WTT2 800 aaKnown RBP5.52□□□□□ -1.53
TMEM260-210ENST00000556422 ATP6V1E2Q96A05 226 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 LZTFL1Q9NQ48 299 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 SCHIP1Q9P0W5 487 aaPredicted RBP5.52□□□□□ -1.53
TMEM260-210ENST00000556422 DMGDHQ9UI17 866 aaKnown RBP5.52□□□□□ -1.53
TMEM260-210ENST00000556422 LCMT1Q9UIC8 334 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 PAIP2BQ9ULR5 123 aaKnown RBP5.52□□□□□ -1.53
TMEM260-210ENST00000556422 KIAA1024Q9UPX6 916 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 DOCK1Q14185 1865 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 KDM3AQ9Y4C1 1321 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 NPHP3-ACAD11A0A0J9YXS1 232 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 EME2A4GXA9 379 aaPredicted RBP5.52□□□□□ -1.53
TMEM260-210ENST00000556422 MSH4O15457 936 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 SGTAO43765 313 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 TBC1D12O60347 775 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 GBP2P32456 591 aaPredicted RBP5.52□□□□□ -1.53
TMEM260-210ENST00000556422 HPDP32754 393 aaPredicted RBP5.52□□□□□ -1.53
TMEM260-210ENST00000556422 PPP1R2P41236 205 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 DNM2P50570 870 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 GNG11P61952 73 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 MAP3K9P80192 1104 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 CACNB1Q02641 598 aaPredicted RBP5.52□□□□□ -1.53
TMEM260-210ENST00000556422 CXCL9Q07325 125 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 PLEKHG6Q3KR16 790 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 ODR4Q5SWX8 454 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 FKBP1CQ5VVH2 108 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 SLC30A10Q6XR72 485 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 MIGA2Q7L4E1 593 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 CCDC84Q86UT8 332 aaPredicted RBP5.52□□□□□ -1.53
TMEM260-210ENST00000556422 ERGIC2Q96RQ1 377 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 RABEP2Q9H5N1 569 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 RGL1Q9NZL6 768 aa5.52□□□□□ -1.53
TMEM260-210ENST00000556422 ARPC4-TTLL3A0A0A6YYG9 625 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 RASA4BC9J798 803 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 TBX3O15119 743 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 IDEP14735 1019 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms