RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 PPM1AP35813 382 aa10.05□□□□□ -0.8
LINC00520-204ENST00000556417 VCPP55072 806 aaKnown RBP10.05□□□□□ -0.8
LINC00520-204ENST00000556417 AKAP17AQ02040 695 aaKnown RBP10.05□□□□□ -0.8
LINC00520-204ENST00000556417 LRCH2Q5VUJ6 765 aa10.05□□□□□ -0.8
LINC00520-204ENST00000556417 BLOC1S2Q6QNY1 142 aa10.05□□□□□ -0.8
LINC00520-204ENST00000556417 B3GNT9Q6UX72 402 aa10.05□□□□□ -0.8
LINC00520-204ENST00000556417 HELQQ8TDG4 1101 aa10.05□□□□□ -0.8
LINC00520-204ENST00000556417 CASP10Q92851 521 aa10.05□□□□□ -0.8
LINC00520-204ENST00000556417 PRRX2Q99811 253 aa10.05□□□□□ -0.8
LINC00520-204ENST00000556417 SLC26A6Q9BXS9 759 aa10.05□□□□□ -0.8
LINC00520-204ENST00000556417 NIFKQ9BYG3 293 aaKnown RBP10.05□□□□□ -0.8
LINC00520-204ENST00000556417 FNDC1Q4ZHG4 1894 aaPredicted RBP10.04□□□□□ -0.8
LINC00520-204ENST00000556417 TECTAO75443 2155 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 CYP3A7-CYP3A51PA0A087WV96 503 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 IGKV6-21A0A0C4DH24 114 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 TMEM150BA6NC51 233 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 CLASP2O75122 1294 aaKnown RBP10.04□□□□□ -0.8
LINC00520-204ENST00000556417 CXCL14O95715 111 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 PDGFBP01127 241 aaPredicted RBP10.04□□□□□ -0.8
LINC00520-204ENST00000556417 SP100P23497 879 aaPredicted RBP10.04□□□□□ -0.8
LINC00520-204ENST00000556417 CYP3A7P24462 503 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 AVPR2P30518 371 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 PHKA2P46019 1235 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 ALDH7A1P49419 539 aaKnown RBP10.04□□□□□ -0.8
LINC00520-204ENST00000556417 JAK3P52333 1124 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 BCAR1P56945 870 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 EVCP57679 992 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 CDC42EP1Q00587 391 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 TBC1D8BQ0IIM8 1120 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 SMC1AQ14683 1233 aaKnown RBP10.04□□□□□ -0.8
LINC00520-204ENST00000556417 Q4G0T1 1027 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 TMEM173Q86WV6 379 aaPredicted RBP10.04□□□□□ -0.8
LINC00520-204ENST00000556417 CCDC148Q8NFR7 591 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 TBCKQ8TEA7 893 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 NLRP7Q8WX94 980 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 RIPOR3Q96MK2 946 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 SH2D3AQ9BRG2 576 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 TRAIPQ9BWF2 469 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 TEKT3Q9BXF9 490 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 ADAM7Q9H2U9 754 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 POMKQ9H5K3 350 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 NCOA5Q9HCD5 579 aaKnown RBP10.04□□□□□ -0.8
LINC00520-204ENST00000556417 SH3GLB2Q9NR46 395 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 CHST12Q9NRB3 414 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 DACT1Q9NYF0 836 aa10.04□□□□□ -0.8
LINC00520-204ENST00000556417 LOXHD1Q8IVV2 1947 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 PIEZO1Q92508 2521 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 A0A087WZ62 844 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 C2CD4DB7Z1M9 353 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 M0R2N6 131 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 MAFO75444 373 aaPredicted RBP10.03□□□□□ -0.8
LINC00520-204ENST00000556417 NLRP5P59047 1200 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 CCT2P78371 535 aaKnown RBP10.03□□□□□ -0.8
LINC00520-204ENST00000556417 ITIH3Q06033 890 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 MTERF2Q49AM1 385 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 XKR3Q5GH77 459 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 MIER3Q7Z3K6 550 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 KREMEN2Q8NCW0 462 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 RDM1Q8NG50 284 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 AUTS2Q8WXX7 1259 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 LPPQ93052 612 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 SCLT1Q96NL6 688 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 FDXACB1Q9BRP7 624 aaPredicted RBP10.03□□□□□ -0.8
LINC00520-204ENST00000556417 MRPL9Q9BYD2 267 aaKnown RBP10.03□□□□□ -0.8
LINC00520-204ENST00000556417 GCOM2Q9BZD3 368 aaPredicted RBP10.03□□□□□ -0.8
LINC00520-204ENST00000556417 ZBP1Q9H171 429 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 TSHZ2Q9NRE2 1034 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 SEPT9Q9UHD8 586 aaPredicted RBP10.03□□□□□ -0.8
LINC00520-204ENST00000556417 PCDHA4Q9UN74 947 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 NR2E1Q9Y466 385 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 IRAK3Q9Y616 596 aa10.03□□□□□ -0.8
LINC00520-204ENST00000556417 ZNF318Q5VUA4 2279 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 MEIS3P2A8K0S8 358 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 ZNF623O75123 536 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 TDP2O95551 362 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 BRD1O95696 1058 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 GALTP07902 379 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 WEE2P0C1S8 567 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 DNM2P50570 870 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 NPY5RQ15761 445 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 LONRF3Q496Y0 759 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 CES5AQ6NT32 575 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 KANK3Q6NY19 840 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 ANO5Q75V66 913 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 ZBTB33Q86T24 672 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 DDX53Q86TM3 631 aaKnown RBP10.02□□□□□ -0.81
LINC00520-204ENST00000556417 KSR1Q8IVT5 923 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 VPS52Q8N1B4 723 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 C12orf76Q8N812 135 aaPredicted RBP10.02□□□□□ -0.81
LINC00520-204ENST00000556417 ETNPPLQ8TBG4 499 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 BCL7CQ8WUZ0 217 aaPredicted RBP10.02□□□□□ -0.81
LINC00520-204ENST00000556417 TMEM169Q96HH4 297 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 MBOAT7Q96N66 472 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 NECTIN4Q96NY8 510 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 NRDE2Q9H7Z3 1164 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 SUCLA2Q9P2R7 463 aaPredicted RBP10.02□□□□□ -0.81
LINC00520-204ENST00000556417 SORCS3Q9UPU3 1222 aa10.02□□□□□ -0.81
LINC00520-204ENST00000556417 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.01□□□□□ -0.81
LINC00520-204ENST00000556417 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
LINC00520-204ENST00000556417 ZC3H11AO75152 810 aaKnown RBP eCLIP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms