RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 NASPP49321 788 aaPredicted RBP10.76□□□□□ -0.69
SRP54-210ENST00000556380 GPC3P51654 580 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 WDR5P61964 334 aaKnown RBP10.76□□□□□ -0.69
SRP54-210ENST00000556380 IKBKEQ14164 716 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 SLC39A14Q15043 492 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.76□□□□□ -0.69
SRP54-210ENST00000556380 RTN4RL1Q86UN2 441 aaPredicted RBP10.76□□□□□ -0.69
SRP54-210ENST00000556380 EXOC8Q8IYI6 725 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 PRPF31Q8WWY3 499 aaKnown RBP10.76□□□□□ -0.69
SRP54-210ENST00000556380 PNMA5Q96PV4 448 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 MAP7D2Q96T17 732 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 IFIH1Q9BYX4 1025 aaKnown RBP10.76□□□□□ -0.69
SRP54-210ENST00000556380 RAB34Q9BZG1 259 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 MTIF3Q9H2K0 278 aaKnown RBP10.76□□□□□ -0.69
SRP54-210ENST00000556380 TMX1Q9H3N1 280 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 ERVK-5Q9HDB9 667 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 NPDC1Q9NQX5 325 aaPredicted RBP10.76□□□□□ -0.69
SRP54-210ENST00000556380 SUCLA2Q9P2R7 463 aaPredicted RBP10.76□□□□□ -0.69
SRP54-210ENST00000556380 FBXO2Q9UK22 296 aaPredicted RBP10.76□□□□□ -0.69
SRP54-210ENST00000556380 PADI3Q9ULW8 664 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 KIAA1024Q9UPX6 916 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 AKT3Q9Y243 479 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 NOC2LQ9Y3T9 749 aaKnown RBP10.76□□□□□ -0.69
SRP54-210ENST00000556380 SLC4A7Q9Y6M7 1214 aa10.76□□□□□ -0.69
SRP54-210ENST00000556380 ENPP3O14638 875 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 GAS2O43903 313 aaKnown RBP10.75□□□□□ -0.69
SRP54-210ENST00000556380 EFCAB14O75071 495 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 DGAT1O75907 488 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 F13A1P00488 732 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 DARSP14868 501 aaKnown RBP10.75□□□□□ -0.69
SRP54-210ENST00000556380 EIF4BP23588 611 aaKnown RBP10.75□□□□□ -0.69
SRP54-210ENST00000556380 ARL2P36404 184 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 DNM2P50570 870 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 DEFB103AP81534 67 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 CDC42EP1Q00587 391 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 GRB10Q13322 594 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 BECN1Q14457 450 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 EMC2Q15006 297 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 FOXD4L5Q5VV16 416 aaPredicted RBP10.75□□□□□ -0.69
SRP54-210ENST00000556380 KRT79Q5XKE5 535 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 HAUS3Q68CZ6 603 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 FAM43BQ6ZT52 329 aaPredicted RBP10.75□□□□□ -0.69
SRP54-210ENST00000556380 NUDT18Q6ZVK8 323 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 KCNK18Q7Z418 384 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 FAM228AQ86W67 206 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 KSR1Q8IVT5 923 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 CRIPAKQ8N1N5 446 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 SNX29Q8TEQ0 813 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 LINC01599Q8WXQ3 324 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 FOXD4L4Q8WXT5 416 aaPredicted RBP10.75□□□□□ -0.69
SRP54-210ENST00000556380 SLC7A3Q8WY07 619 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 APBB2Q92870 758 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 TMEM143Q96AN5 459 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 AK8Q96MA6 479 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 OSMRQ99650 979 aa10.75□□□□□ -0.69
SRP54-210ENST00000556380 SRPRBQ9Y5M8 271 aaKnown RBP10.75□□□□□ -0.69
SRP54-210ENST00000556380 ZBBXA8MT70 800 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 M0QZ92 97 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 SLC26A4O43511 780 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 RPS6KA5O75582 802 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 ATP2A2P16615 1042 aaKnown RBP10.74□□□□□ -0.69
SRP54-210ENST00000556380 CYP11B2P19099 503 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 MARCKSP29966 332 aaPredicted RBP10.74□□□□□ -0.69
SRP54-210ENST00000556380 DDIT3P35638 169 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 LONP1P36776 959 aaKnown RBP10.74□□□□□ -0.69
SRP54-210ENST00000556380 MLLT3P42568 568 aaPredicted RBP10.74□□□□□ -0.69
SRP54-210ENST00000556380 POLGP54098 1239 aaPredicted RBP10.74□□□□□ -0.69
SRP54-210ENST00000556380 KCNC4Q03721 635 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 LAMTOR4Q0VGL1 99 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 DSC3Q14574 896 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 TMEM119Q4V9L6 283 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 USP49Q70CQ1 688 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 ZNF410Q86VK4 478 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 HERC6Q8IVU3 1022 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 KCTD17Q8N5Z5 321 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 LINC00301Q8NCQ3 95 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 LRRC15Q8TF66 581 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 ZNF668Q96K58 619 aaPredicted RBP10.74□□□□□ -0.69
SRP54-210ENST00000556380 PPP1R16BQ96T49 567 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 SLC9A7Q96T83 725 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 PBX4Q9BYU1 374 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 IFT122Q9HBG6 1241 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 DDX19AQ9NUU7 478 aaKnown RBP10.74□□□□□ -0.69
SRP54-210ENST00000556380 TFIP11Q9UBB9 837 aaKnown RBP10.74□□□□□ -0.69
SRP54-210ENST00000556380 ST3GAL5Q9UNP4 418 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 GINS2Q9Y248 185 aa10.74□□□□□ -0.69
SRP54-210ENST00000556380 TRANK1O15050 2925 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 SIP14410 1827 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 A0A087WZ62 844 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 E9PMD0 336 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 ASAP2O43150 1006 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 MGEA5O60502 916 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 CSDE1O75534 798 aaKnown RBP10.73□□□□□ -0.69
SRP54-210ENST00000556380 GJB5O95377 273 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 EYA4O95677 639 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 GLRA2P23416 452 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 RABGGTBP53611 331 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 FAM189BP81408 668 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 CEBPZQ03701 1054 aaKnown RBP10.73□□□□□ -0.69
SRP54-210ENST00000556380 PADI6Q6TGC4 694 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms